RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 APOL2Q9BQE5 337 aa27.29■■□□□ 1.96
HOXB3-211ENST00000490677 TRIM10Q9UDY6 481 aa27.29■■□□□ 1.96
HOXB3-211ENST00000490677 TMEM184BQ9Y519 407 aaPredicted RBP27.29■■□□□ 1.96
HOXB3-211ENST00000490677 AGAP14A8MT82 685 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 SGTAO43765 313 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 KCNJ13O60928 360 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 POP7O75817 140 aaKnown RBP27.28■■□□□ 1.96
HOXB3-211ENST00000490677 ITGB6P18564 788 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 TNNT3P45378 269 aaPredicted RBP27.28■■□□□ 1.96
HOXB3-211ENST00000490677 CAPZBP47756 277 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 XIAPP98170 497 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 GTF2H3Q13889 308 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 TAF1AQ15573 450 aaPredicted RBP27.28■■□□□ 1.96
HOXB3-211ENST00000490677 CEACAM20Q6UY09 585 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 AMZ2Q86W34 360 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 TRIM48Q8IWZ4 208 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 OR4K2Q8NGD2 314 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 CCDC110Q8TBZ0 833 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 ZNF398Q8TD17 642 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 SPATA13Q96N96 652 aa27.28■■□□□ 1.96
HOXB3-211ENST00000490677 OR2AG2A6NM03 316 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 B8ZZF3 427 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 STX7O15400 261 aaKnown RBP27.27■■□□□ 1.96
HOXB3-211ENST00000490677 CAPN5O15484 640 aaPredicted RBP27.27■■□□□ 1.96
HOXB3-211ENST00000490677 KCNN4O15554 427 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 PRAMEF1O95521 474 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 DLGAP3O95886 979 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 LPOP22079 712 aaPredicted RBP27.27■■□□□ 1.96
HOXB3-211ENST00000490677 NFE2L1Q14494 772 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 CCDC181Q5TID7 509 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 TMEM220Q6QAJ8 160 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 RBM12BQ8IXT5 1001 aaKnown RBP27.27■■□□□ 1.96
HOXB3-211ENST00000490677 IL22RA1Q8N6P7 574 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 TGM7Q96PF1 710 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 ZPBPQ9BS86 351 aa27.27■■□□□ 1.96
HOXB3-211ENST00000490677 ZCCHC2Q9C0B9 1178 aaKnown RBP27.27■■□□□ 1.96
HOXB3-211ENST00000490677 DNMT3AQ9Y6K1 912 aaPredicted RBP27.27■■□□□ 1.96
HOXB3-211ENST00000490677 MACROD2A1Z1Q3 448 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 TOX3O15405 576 aaPredicted RBP27.26■■□□□ 1.95
HOXB3-211ENST00000490677 KIF1CO43896 1103 aaKnown RBP27.26■■□□□ 1.95
HOXB3-211ENST00000490677 VCLP18206 1134 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 RPE65Q16518 533 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 BEND7Q8N7W2 519 aaPredicted RBP27.26■■□□□ 1.95
HOXB3-211ENST00000490677 ZSCAN1Q8NBB4 408 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 NAT14Q8WUY8 206 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 TTC25Q96NG3 672 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 ZNF768Q9H5H4 540 aaKnown RBP27.26■■□□□ 1.95
HOXB3-211ENST00000490677 ARNT2Q9HBZ2 717 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 EPHA6Q9UF33 1036 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 FKBPLQ9UIM3 349 aa27.26■■□□□ 1.95
HOXB3-211ENST00000490677 AAR2Q9Y312 384 aaKnown RBP27.26■■□□□ 1.95
HOXB3-211ENST00000490677 C5orf60A6NFR6 353 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 IPO7O95373 1038 aaKnown RBP27.25■■□□□ 1.95
HOXB3-211ENST00000490677 ZNF140P52738 457 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-211ENST00000490677 PPP1CAP62136 330 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 KLF1Q13351 362 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-211ENST00000490677 METRNLQ641Q3 311 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 DARS2Q6PI48 645 aaKnown RBP27.25■■□□□ 1.95
HOXB3-211ENST00000490677 PRSS42Q7Z5A4 293 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 NLGN4XQ8N0W4 816 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 NLGN4YQ8NFZ3 816 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-211ENST00000490677 CXorf40BQ96DE9 158 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 RAB33BQ9H082 229 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 SEMA5BQ9P283 1151 aa27.25■■□□□ 1.95
HOXB3-211ENST00000490677 SPTA1P02549 2419 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 LOC101059948A0A1B0GTJ6 334 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 DDX3YO15523 660 aaKnown RBP27.24■■□□□ 1.95
HOXB3-211ENST00000490677 SRP72O76094 671 aaKnown RBP27.24■■□□□ 1.95
HOXB3-211ENST00000490677 STK17BO94768 372 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 TJP3O95049 919 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 FAM87AP0C7U9 286 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 AMD1P17707 334 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 NAP1L1P55209 391 aaKnown RBP27.24■■□□□ 1.95
HOXB3-211ENST00000490677 SH3BP2P78314 561 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 KCTD11Q693B1 232 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 MICALCLQ6ZW33 695 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 OR13C4Q8NGS5 318 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 KLHL6Q8WZ60 621 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 BAG1Q99933 345 aaPredicted RBP27.24■■□□□ 1.95
HOXB3-211ENST00000490677 PACSIN2Q9UNF0 486 aaPredicted RBP27.24■■□□□ 1.95
HOXB3-211ENST00000490677 PSMD13Q9UNM6 376 aa27.24■■□□□ 1.95
HOXB3-211ENST00000490677 C2orf81A6NN90 581 aa27.23■■□□□ 1.95
HOXB3-211ENST00000490677 POLR1CO15160 346 aaPredicted RBP27.23■■□□□ 1.95
HOXB3-211ENST00000490677 ZNF28P17035 718 aa27.23■■□□□ 1.95
HOXB3-211ENST00000490677 FNBP1LQ5T0N5 605 aa27.23■■□□□ 1.95
HOXB3-211ENST00000490677 SLC45A3Q96JT2 553 aa27.23■■□□□ 1.95
HOXB3-211ENST00000490677 C19orf43Q9BQ61 176 aa27.23■■□□□ 1.95
HOXB3-211ENST00000490677 STARD5Q9NSY2 213 aa27.23■■□□□ 1.95
HOXB3-211ENST00000490677 LDB2O43679 373 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 MAP4P27816 1152 aaKnown RBP27.22■■□□□ 1.95
HOXB3-211ENST00000490677 HALP42357 657 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 SEPHS1P49903 392 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 SPARCL1Q14515 664 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 BCL7AQ4VC05 210 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 DET1Q7L5Y6 550 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 ZNF514Q96K75 400 aaPredicted RBP27.22■■□□□ 1.95
HOXB3-211ENST00000490677 LINC00615Q96LM1 132 aaPredicted RBP27.22■■□□□ 1.95
HOXB3-211ENST00000490677 TBL1YQ9BQ87 522 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 FERMT1Q9BQL6 677 aa27.22■■□□□ 1.95
HOXB3-211ENST00000490677 ASB8Q9H765 288 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms