RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 AGAP3Q96P47 875 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ACTR5Q9H9F9 607 aaPredicted RBP13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ATP13A2Q9NQ11 1180 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 SOHLH2Q9NX45 425 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 DTLQ9NZJ0 730 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 WDR37Q9Y2I8 494 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 PTRH2Q9Y3E5 179 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 RTTNQ86VV8 2226 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 A0A0J9YYE9 177 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 FAM221AA4D161 298 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 C9J4A7 227 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 ZBTB11O95625 1053 aaPredicted RBP13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 TRBC1P01850 177 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 IGHEP01854 428 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 KRT3P12035 628 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 KLK2P20151 261 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 FECHP22830 423 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 MMP8P22894 467 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 IL4RP24394 825 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 HADHAP40939 763 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 CA7P43166 264 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 PLCL1Q15111 1095 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 ZNF789Q5FWF6 425 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 HENMT1Q5T8I9 393 aaKnown RBP13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 TMEM207Q6UWW9 146 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 CATSPER1Q8NEC5 780 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 OR1L3Q8NH93 324 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 COG1Q8WTW3 980 aa13.34□□□□□ -0.27
EXOSC3-207ENST00000490516 BICDL2A1A5D9 508 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 TMEM150CB9EJG8 249 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 EEF2KO00418 725 aaKnown RBP13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 ATMINO43313 823 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 FZD6O60353 706 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 PEX11BO96011 259 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 CYP2A7P20853 494 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 FOLR3P41439 243 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 KRT85P78386 507 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 SRSF11Q05519 484 aaKnown RBP13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 PRKD1Q15139 912 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 TLR1Q15399 786 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 MLIPQ5VWP3 458 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 ZNF385CQ66K41 422 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 KLHL35Q6PF15 583 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 PPP1R32Q7Z5V6 425 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 ADGRG6Q86SQ4 1221 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 NDUFAF2Q8N183 169 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 MAGEB10Q96LZ2 347 aaPredicted RBP13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 TAAR6Q96RI8 345 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 CD180Q99467 661 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 SPOCK3Q9BQ16 436 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 MGME1Q9BQP7 344 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 DHRS4Q9BTZ2 278 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 MAN1B1Q9UKM7 699 aa13.33□□□□□ -0.28
EXOSC3-207ENST00000490516 OR5K3A6NET4 321 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 CHUKO15111 745 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 KMOO15229 486 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 UNC5CO95185 931 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 ERCC2P18074 760 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 IDSP22304 550 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 HTR7P34969 479 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 HSPA9P38646 679 aaKnown RBP13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 CSNK1G2P78368 415 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 AIMP2Q13155 320 aaKnown RBP13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 CYP2A13Q16696 494 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 CA9Q16790 459 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 AGAP9Q5VTM2 703 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 AGAP7PQ5VUJ5 663 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 WASH2PQ6VEQ5 465 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 LRRTM4Q86VH4 590 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 ZNF547Q8IVP9 402 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 FMR1NBQ8N0W7 255 aaPredicted RBP13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 SLC20A1Q8WUM9 679 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 NR4A3Q92570 626 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 AGAP4Q96P64 663 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 TIMM29Q9BSF4 260 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 SLC7A5P2Q9GIP4 190 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 FAM83DQ9H4H8 585 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 FANCEQ9HB96 536 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 TRIM39Q9HCM9 518 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 HRASLS2Q9NWW9 162 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 BTRCQ9Y297 605 aa13.32□□□□□ -0.28
EXOSC3-207ENST00000490516 GTPBP10A4D1E9 387 aaKnown RBP13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 DAPK3O43293 454 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 CNOT3O75175 753 aaKnown RBP13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 SLC25A14O95258 325 aaPredicted RBP13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 CLDN14O95500 239 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 CYP1A1P04798 512 aaPredicted RBP13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 AGXTP21549 392 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 PPP1R2P41236 205 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 SPINT3P49223 89 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 EPHB1P54762 984 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 AIF1P55008 147 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 PTP4A2Q12974 167 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 ZFYVE27Q5T4F4 411 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 DPY19L2P1Q6NXN4 242 aa13.31□□□□□ -0.28
EXOSC3-207ENST00000490516 RPUSD3Q6P087 351 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms