RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 RSPH14Q9UHP6 348 aa11.05□□□□□ -0.64
DUBR-204ENST00000490441 PCDHB3Q9Y5E6 796 aa11.05□□□□□ -0.64
DUBR-204ENST00000490441 ALG6Q9Y672 507 aa11.05□□□□□ -0.64
DUBR-204ENST00000490441 SLC30A1Q9Y6M5 507 aa11.05□□□□□ -0.64
DUBR-204ENST00000490441 RPS6KL1Q9Y6S9 549 aa11.05□□□□□ -0.64
DUBR-204ENST00000490441 HECTD1Q9ULT8 2610 aa11.05□□□□□ -0.64
DUBR-204ENST00000490441 hCG_1818297A0A087WSY0 165 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 GLYATL1P3A0A0U1RQE8 302 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 HACD1B0YJ81 288 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 TERTO14746 1132 aaKnown RBP11.04□□□□□ -0.64
DUBR-204ENST00000490441 BRAFP15056 766 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 STAT5AP42229 794 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 MAGEA1P43355 309 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 LEPRP48357 1165 aaKnown RBP11.04□□□□□ -0.64
DUBR-204ENST00000490441 SEPT6Q14141 434 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 GPR18Q14330 331 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 IL11RAQ14626 422 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 PLCL1Q15111 1095 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 SPA17Q15506 151 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 SLC1A5Q15758 541 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 CHRNA6Q15825 494 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 TAZQ16635 292 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 C6orf15Q6UXA7 325 aaPredicted RBP11.04□□□□□ -0.64
DUBR-204ENST00000490441 PRSS42Q7Z5A4 293 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 KATNAL2Q8IYT4 538 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 RCOR2Q8IZ40 523 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 ZNF567Q8N184 647 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 TTC30BQ8N4P2 665 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 C9orf43Q8TAL5 461 aaPredicted RBP11.04□□□□□ -0.64
DUBR-204ENST00000490441 DTX3LQ8TDB6 740 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 APOBEC4Q8WW27 367 aaKnown RBP11.04□□□□□ -0.64
DUBR-204ENST00000490441 RSC1A1Q92681 617 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 ELMO2Q96JJ3 720 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 MRGPRX2Q96LB1 330 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 QKIQ96PU8 341 aaKnown RBP eCLIP11.04□□□□□ -0.64
DUBR-204ENST00000490441 FCRL5Q96RD9 977 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 ZNF768Q9H5H4 540 aaKnown RBP11.04□□□□□ -0.64
DUBR-204ENST00000490441 LNPEPQ9UIQ6 1025 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 TRHDEQ9UKU6 1024 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 TMPRSS11EQ9UL52 423 aa11.04□□□□□ -0.64
DUBR-204ENST00000490441 MACROD2A1Z1Q3 448 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 PRR19A6NJB7 356 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 H7C0C1 242 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 STX7O15400 261 aaKnown RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 UGT1A9O60656 530 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 POP7O75817 140 aaKnown RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 NDUFA10O95299 355 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 UGT1A6P19224 532 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 MSH3P20585 1137 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 UGT1A1P22309 533 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 UGT1A4P22310 534 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 PBLDP30039 288 aaPredicted RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 AKT1P31749 480 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 DLSTP36957 453 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 CHRNA4P43681 627 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 ATP5OP48047 213 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 ARL4DP49703 201 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 GEMP55040 296 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 HADHBP55084 474 aaKnown RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 SH3BP2P78314 561 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 LONRF2Q1L5Z9 754 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 DEFB109BQ30KR1 87 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 GPRC6AQ5T6X5 926 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 ITPRIPL1Q6GPH6 555 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 TMEM220Q6QAJ8 160 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 FAM92BQ6ZTR7 304 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 C11orf96Q7Z7L8 435 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 PPP1R3BQ86XI6 285 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 PTRH1Q86Y79 214 aaKnown RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 GALNT6Q8NCL4 622 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 DDHD1Q8NEL9 900 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 OXNAD1Q96HP4 312 aaPredicted RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 ZNF514Q96K75 400 aaPredicted RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 GOLPH3Q9H4A6 298 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 UGT1A7Q9HAW7 530 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 UGT1A10Q9HAW8 530 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 UGT1A8Q9HAW9 530 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 PDE7BQ9NP56 450 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 IL17CQ9P0M4 197 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 EPHA6Q9UF33 1036 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 WDR37Q9Y2I8 494 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 DNMT3AQ9Y6K1 912 aaPredicted RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 PTPN13Q12923 2485 aa11.03□□□□□ -0.64
DUBR-204ENST00000490441 RP1L1Q8IWN7 2480 aaPredicted RBP11.03□□□□□ -0.64
DUBR-204ENST00000490441 OR2AG2A6NM03 316 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 C2orf81A6NN90 581 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 ARHGAP6O43182 974 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 BUD23O43709 281 aaKnown RBP11.02□□□□□ -0.65
DUBR-204ENST00000490441 KIF1CO43896 1103 aaKnown RBP11.02□□□□□ -0.65
DUBR-204ENST00000490441 KATNA1O75449 491 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 ANXA9O76027 345 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 STK10O94804 968 aaKnown RBP11.02□□□□□ -0.65
DUBR-204ENST00000490441 KIAA0754O94854 1291 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 PRAMEF1O95521 474 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 MT-ND3P03897 115 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 CCNYL3P0C7X3 344 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 ZNF28P17035 718 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 NELFEP18615 380 aaKnown RBP11.02□□□□□ -0.65
DUBR-204ENST00000490441 CTNNA2P26232 953 aa11.02□□□□□ -0.65
DUBR-204ENST00000490441 OAS2P29728 719 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms