RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ARFGAP1Q8N6T3 406 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 RTL3Q8N8U3 475 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 MYRIPQ8NFW9 859 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 WFDC5Q8TCV5 224 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 HOXB13Q92826 284 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 TTC17Q96AE7 1141 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 C1GALT1C1Q96EU7 318 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 CLPTM1LQ96KA5 538 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PEBP4Q96S96 227 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 FEM1AQ9BSK4 669 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 MAK16Q9BXY0 300 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 TMEM248Q9NWD8 314 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 GEMIN8Q9NWZ8 242 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PLA2G3Q9NZ20 509 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 RCOR3Q9P2K3 495 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 THAP10Q9P2Z0 257 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SUN2Q9UH99 717 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 MMP17Q9ULZ9 603 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZFR2Q9UPR6 939 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 NUP205Q92621 2012 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 EML5Q05BV3 1969 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SHROOM3Q8TF72 1996 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 KIAA1549LQ6ZVL6 1849 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SPAARA0A1B0GVQ0 90 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 MACROD2A1Z1Q3 448 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZSCAN5CA6NGD5 496 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 KIF5CO60282 957 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRB1P04280 392 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 RAP2AP10114 183 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 GOT1P17174 413 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 COMTP21964 271 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 SERPINB6P35237 376 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 CETN2P41208 172 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 PLK1P53350 603 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 GEMIN4P57678 1058 aaKnown RBP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 YBEYP58557 167 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 ECT2LQ008S8 904 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 GNA12Q03113 381 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 SLC20A2Q08357 652 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 SEMA3BQ13214 749 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 MRPL49Q13405 166 aaKnown RBP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZNF234Q14588 700 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 CA9Q16790 459 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 PARP15Q460N3 678 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 FUT11Q495W5 492 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 EMC10Q5UCC4 262 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 LRRC38Q5VT99 294 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 RETSATQ6NUM9 610 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 C11orf63Q6NUN7 778 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 TMCO3Q6UWJ1 677 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 RFX8Q6ZV50 586 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 APCDD1Q8J025 514 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 D2HGDHQ8N465 521 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRR18Q8N4B5 295 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 CHCHD4Q8N4Q1 142 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 RNF10Q8N5U6 811 aaKnown RBP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 DCAF4L2Q8NA75 395 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 IL17RCQ8NAC3 791 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 KDM1BQ8NB78 822 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 TSTD1Q8NFU3 115 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 STON2Q8WXE9 905 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 P2RY11Q96G91 374 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 LMLNQ96KR4 655 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 CALN1Q9BXU9 219 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 MAGEB5Q9BZ81 275 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 MAGEH1Q9H213 219 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 BCCIPQ9P287 314 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 TFR2Q9UP52 801 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 ERVW-1Q9UQF0 538 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 POLHQ9Y253 713 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 REXO2Q9Y3B8 237 aaKnown RBP8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 RAI2Q9Y5P3 530 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 ALG6Q9Y672 507 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 STON1Q9Y6Q2 735 aa8.12□□□□□ -1.11
TRAPPC12-221ENST00000489032 ASCC3Q8N3C0 2202 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 UQCRHLA0A096LP55 91 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 LRRD1A4D1F6 860 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 ARHGAP42A6NI28 874 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 SGK1O00141 431 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 DYNC1I1O14576 645 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 SLC16A6O15403 523 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 HOXA3O43365 443 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 PSTPIP1O43586 416 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRICKLE3O43900 615 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 RNASEH1O60930 286 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 APBB3O95704 486 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 UQCRHP07919 91 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 TCF4P15884 667 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 ERCC2P18074 760 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 DDCP20711 480 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 CASQ1P31415 396 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 IL12RB1P42701 662 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 NDST2P52849 883 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 TAS2R40P59535 323 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 GNG11P61952 73 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 SP140Q13342 867 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 TUBB2AQ13885 445 aa8.11□□□□□ -1.11
TRAPPC12-221ENST00000489032 BYSLQ13895 437 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms