RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TUBB3Q13509 450 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 TFDP2Q14188 446 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 ERV3-1Q14264 604 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 IGFBP7Q16270 282 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 TAZQ16635 292 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 SIRPB2Q5JXA9 342 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 LDLRAP1Q5SW96 308 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 FAM151BQ6UXP7 276 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 GLT6D1Q7Z4J2 308 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 AMZ2Q86W34 360 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 DDHD1Q8NEL9 900 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 CCDC42Q96M95 316 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 NHEJ1Q9H9Q4 299 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-231ENST00000488905 HACD3Q9P035 362 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 IL17CQ9P0M4 197 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 SEMA5BQ9P283 1151 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 KLHL8Q9P2G9 620 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-231ENST00000488905 PCDHGA6Q9Y5G7 932 aa18.05■□□□□ 0.48
HDAC6-231ENST00000488905 PRRC2CQ9Y520 2896 aaKnown RBP18.05■□□□□ 0.48
HDAC6-231ENST00000488905 SPTBN1Q01082 2364 aaKnown RBP18.04■□□□□ 0.48
HDAC6-231ENST00000488905 IGHV5-51A0A0C4DH38 117 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 F5H423 210 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-231ENST00000488905 MKRN2OSH3BPM6 223 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 MTSS1O43312 755 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 CBFA2T2O43439 604 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 CST8O60676 142 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 MFAP3LO75121 409 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 KATNA1O75449 491 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 TIAF1O95411 115 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 MT-ND3P03897 115 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 TPM1P09493 284 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 CCNYL3P0C7X3 344 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 NR1D1P20393 614 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 COMTP21964 271 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 CTSCP53634 463 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 KLRB1Q12918 225 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 DNASE1L3Q13609 305 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 ITGA9Q13797 1035 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 CHRNA6Q15825 494 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 PPP2R5EQ16537 467 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 FAM83HQ6ZRV2 1179 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-231ENST00000488905 SLC25A41Q8N5S1 370 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 RASGEF1AQ8N9B8 481 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 BLOC1S5Q8TDH9 187 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 UBXN4Q92575 508 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 OXNAD1Q96HP4 312 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-231ENST00000488905 SLC41A2Q96JW4 573 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 MRGPRX2Q96LB1 330 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 PDE7BQ9NP56 450 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 LHX9Q9NQ69 397 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.04■□□□□ 0.48
HDAC6-231ENST00000488905 PSMD13Q9UNM6 376 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 MED13Q9UHV7 2174 aa18.04■□□□□ 0.48
HDAC6-231ENST00000488905 GLYATL1P3A0A0U1RQE8 302 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 CDC14CA4D256 554 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 OR2AG2A6NM03 316 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 PSTPIP1O43586 416 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 UGT1A9O60656 530 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 CREG1O75629 220 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 RFPL1O75677 317 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 POP7O75817 140 aaKnown RBP18.03■□□□□ 0.48
HDAC6-231ENST00000488905 EPOP01588 193 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 UGT1A6P19224 532 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 HLA-DPA1P20036 260 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 UGT1A1P22309 533 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 UGT1A4P22310 534 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 NFE2L1Q14494 772 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 PLCL1Q15111 1095 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 SLC1A5Q15758 541 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 RPE65Q16518 533 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 GPRC6AQ5T6X5 926 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 KAZNQ674X7 775 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 KLHL35Q6PF15 583 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 SPOCD1Q6ZMY3 1216 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 TMEM135Q86UB9 458 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 ZNF567Q8N184 647 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 SIDT2Q8NBJ9 832 aaKnown RBP18.03■□□□□ 0.48
HDAC6-231ENST00000488905 IPMKQ8NFU5 416 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 CT55Q8WUE5 264 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 TWSG1Q9GZX9 223 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 UGT1A7Q9HAW7 530 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 UGT1A10Q9HAW8 530 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 UGT1A8Q9HAW9 530 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 SMOXQ9NWM0 555 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 ANKMY1Q9P2S6 941 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 RARRES3Q9UL19 164 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 PADI1Q9ULC6 663 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 PIKFYVEQ9Y2I7 2098 aa18.03■□□□□ 0.48
HDAC6-231ENST00000488905 TLCD2A6NGC4 264 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 C21orf140B9A014 251 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 GAPDHSO14556 408 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-231ENST00000488905 UTP20O75691 2785 aaKnown RBP18.02■□□□□ 0.48
HDAC6-231ENST00000488905 FOLR1P15328 257 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 PBLDP30039 288 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-231ENST00000488905 CA5AP35218 305 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 PMS2P54278 862 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 ADCY2Q08462 1091 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 MPP3Q13368 585 aa18.02■□□□□ 0.48
HDAC6-231ENST00000488905 UBAP2LQ14157 1087 aaKnown RBP18.02■□□□□ 0.48
HDAC6-231ENST00000488905 KCNAB1Q14722 419 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms