RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 HMGCLP35914 325 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 PPP1CAP62136 330 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 TUBB4BP68371 445 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 TUBB2AQ13885 445 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
GGPS1-206ENST00000488594 VSIG1Q86XK7 387 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 CPNE8Q86YQ8 564 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 OR8K5Q8NH50 307 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 RAPGEF5Q92565 580 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 TUBB2BQ9BVA1 445 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 CEP41Q9BYV8 373 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 TRABDQ9H4I3 376 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.65■□□□□ 0.58
GGPS1-206ENST00000488594 TMPRSS11EQ9UL52 423 aa18.65■□□□□ 0.58
GGPS1-206ENST00000488594 FARSAQ9Y285 508 aaKnown RBP18.65■□□□□ 0.58
GGPS1-206ENST00000488594 DNMT3AQ9Y6K1 912 aaPredicted RBP18.65■□□□□ 0.58
GGPS1-206ENST00000488594 RP1L1Q8IWN7 2480 aaPredicted RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 SORBS2O94875 1100 aaKnown RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 EBLN1P0CF75 366 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 LPOP22079 712 aaPredicted RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 VARSP26640 1264 aaKnown RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 LAMB3Q13751 1172 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 PLCL1Q15111 1095 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 CHRNA6Q15825 494 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 RPE65Q16518 533 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 NADK2Q4G0N4 442 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 IZUMO3Q5VZ72 239 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 CPZQ66K79 652 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 SLC9A4Q6AI14 798 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 FAM199XQ6PEV8 388 aaPredicted RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 ZNF517Q6ZMY9 492 aaPredicted RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 HPS6Q86YV9 775 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 CARFQ8N187 725 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 D2HGDHQ8N465 521 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 RUFY1Q96T51 708 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 MAP3K3Q99759 626 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 AKIRIN1Q9H9L7 192 aaPredicted RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 G3BP2Q9UN86 482 aaKnown RBP18.64■□□□□ 0.57
GGPS1-206ENST00000488594 ZNF451Q9Y4E5 1061 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 ICE1Q9Y2F5 2266 aa18.64■□□□□ 0.57
GGPS1-206ENST00000488594 UBA6A0AVT1 1052 aaPredicted RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 LRRD1A4D1F6 860 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 OR5K3A6NET4 321 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 ARGFXA6NJG6 315 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 APOL1O14791 398 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 AURKAO14965 403 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 SCRG1O75711 98 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 POP7O75817 140 aaKnown RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 KLK3P07288 261 aaPredicted RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 H2AFZP0C0S5 128 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 ZFXP17010 805 aaPredicted RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 CCL11P51671 97 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 RPS18P62269 152 aaKnown RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 IL10RAQ13651 578 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 LDLRAP1Q5SW96 308 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 H2AFVQ71UI9 128 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 TMEM126BQ8IUX1 230 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 GPR150Q8NGU9 434 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 ZFPM2Q8WW38 1151 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 CTNNBL1Q8WYA6 563 aaPredicted RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 MR1Q95460 341 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 LRFN5Q96NI6 719 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 OLFM3Q96PB7 478 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 MAK16Q9BXY0 300 aaKnown RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 BPIFA1Q9NP55 256 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 IL26Q9NPH9 171 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 CAPN11Q9UMQ6 739 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 SPO11Q9Y5K1 396 aa18.63■□□□□ 0.57
GGPS1-206ENST00000488594 SPENQ96T58 3664 aaKnown RBP18.63■□□□□ 0.57
GGPS1-206ENST00000488594 UNC79Q9P2D8 2635 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 A0A0A6YYK5 440 aaPredicted RBP18.62■□□□□ 0.57
GGPS1-206ENST00000488594 ZBTB11O95625 1053 aaPredicted RBP18.62■□□□□ 0.57
GGPS1-206ENST00000488594 MT-CYBP00156 380 aaPredicted RBP18.62■□□□□ 0.57
GGPS1-206ENST00000488594 GSDMDP57764 484 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 TMTC4Q5T4D3 741 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 OOSP2Q86WS3 158 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 RASGEF1AQ8N9B8 481 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 SPATA22Q8NHS9 363 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 GLOD4Q9HC38 313 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 LATS2Q9NRM7 1088 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 KCND1Q9NSA2 647 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 HRASLS2Q9NWW9 162 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 NENFQ9UMX5 172 aa18.62■□□□□ 0.57
GGPS1-206ENST00000488594 LUC7L2Q9Y383 392 aaKnown RBP18.62■□□□□ 0.57
GGPS1-206ENST00000488594 DPM1O60762 260 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 PMPCBO75439 489 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 CEACAM4O75871 244 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 DDAH2O95865 285 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 MTHFD1P11586 935 aaKnown RBP18.61■□□□□ 0.57
GGPS1-206ENST00000488594 SPAM1P38567 509 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 PBX1P40424 430 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 TNNT3P45378 269 aaPredicted RBP18.61■□□□□ 0.57
GGPS1-206ENST00000488594 CHAF1BQ13112 559 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 XRCC4Q13426 336 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 TEX44Q53QW1 395 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 HIST2H2BCQ6DN03 193 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 ARMC6Q6NXE6 501 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 BEND7Q8N7W2 519 aaPredicted RBP18.61■□□□□ 0.57
GGPS1-206ENST00000488594 DDHD1Q8NEL9 900 aa18.61■□□□□ 0.57
GGPS1-206ENST00000488594 CPLX3Q8WVH0 158 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms