RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CPEB1Q9BZB8 566 aaKnown RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TSPY26PQ9H489 355 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 RETREG1Q9H6L5 497 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ATP13A3Q9H7F0 1226 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 NOD2Q9HC29 1040 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 NT5MQ9NPB1 228 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 CATSPERZQ9NTU4 200 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 GOLGA6AQ9NYA3 693 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 DKK3Q9UBP4 350 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 B4GALT6Q9UBX8 382 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 IP6K2Q9UHH9 426 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 CD84Q9UIB8 345 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 MOSPD1Q9UJG1 213 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 CLCA2Q9UQC9 943 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 ATP8A1Q9Y2Q0 1164 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TTLL3Q9Y4R7 772 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 PCDHGA1Q9Y5H4 931 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 TNPO3Q9Y5L0 923 aaKnown RBP5.91□□□□□ -1.46
CDHR3-213ENST00000488386 LAMA5O15230 3695 aa5.91□□□□□ -1.46
CDHR3-213ENST00000488386 KIF26BQ2KJY2 2108 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 RP1P56715 2156 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ASXL3Q9C0F0 2248 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 CXorf51AA0A1B0GTR3 108 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 A0A1W2PNU3 283 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 TMEM202A6NGA9 273 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 NPIPB15A6NHN6 443 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 MYO1FO00160 1098 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 YY2O15391 372 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 BRINP1O60477 761 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PROSCO94903 275 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PDHA1P08559 390 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ELFN1P0C7U0 828 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 CKMT1AP12532 417 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 KRT15P19012 456 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 CR2P20023 1033 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 LHCGRP22888 699 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 HTR7P34969 479 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 THBS2P35442 1172 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 EIF2S3P41091 472 aaKnown RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 MMP13P45452 471 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 HCAR3P49019 387 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 HNRNPKP61978 463 aaKnown RBP eCLIP5.9□□□□□ -1.467e-6■■■■□ 19.6
CDHR3-213ENST00000488386 DSC2Q02487 901 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PPARDQ03181 441 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 GBE1Q04446 702 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ELP6Q0PNE2 266 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 SLC10A2Q12908 348 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PIGHQ14442 188 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 NFATC4Q14934 902 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ACOX1Q15067 660 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 GPR19Q15760 415 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 CNGA3Q16281 694 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 VMACQ2NL98 169 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ASTE1Q2TB18 679 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 BOLA3Q53S33 107 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 HS1BP3Q53T59 392 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ANKRD20A8PQ5CZ79 823 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ERAP2Q6P179 960 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 DOK6Q6PKX4 331 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 TEPPQ6URK8 271 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 NPNTQ6UXI9 565 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 CD300LDQ6UXZ3 194 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 LIPIQ6XZB0 460 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 MACC1Q6ZN28 852 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 LCNL1Q6ZST4 164 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 DPPA4Q7L190 304 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 HSD11B1LQ7Z5J1 315 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 TRIM74Q86UV6 250 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 TMPRSS12Q86WS5 348 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 VSTM4Q8IW00 320 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 SLC35F3Q8IY50 421 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PQLC3Q8N755 202 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 NIPA2Q8N8Q9 360 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 KYQ8NBH2 561 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 KCTD6Q8NC69 237 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 DENND6BQ8NEG7 585 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 MAPK15Q8TD08 544 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 TEKT4Q8WW24 435 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 OR1E3Q8WZA6 343 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 RAPGEF5Q92565 580 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 SYN2Q92777 582 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ECHDC3Q96DC8 303 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PWWP2AQ96N64 755 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PSKH2Q96QS6 385 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 IL12RB2Q99665 862 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 SEMA3CQ99985 751 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 BRD8Q9H0E9 1235 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 GOLPH3Q9H4A6 298 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 DEF6Q9H4E7 631 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 FGF22Q9HCT0 170 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 ABHD10Q9NUJ1 306 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 NLGN3Q9NZ94 848 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 KLQ9UEF7 1012 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 SRPK3Q9UPE1 567 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 PLEKHM1Q9Y4G2 1056 aa5.9□□□□□ -1.46
CDHR3-213ENST00000488386 BZW2Q9Y6E2 419 aaKnown RBP5.9□□□□□ -1.46
CDHR3-213ENST00000488386 DMXL2Q8TDJ6 3036 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 CEP295Q9C0D2 2601 aa5.89□□□□□ -1.47
CDHR3-213ENST00000488386 EIF3CLB5ME19 914 aaKnown RBP5.89□□□□□ -1.47
CDHR3-213ENST00000488386 F5H423 210 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms