RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ZNF470Q6ECI4 717 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 PTRHD1Q6GMV3 140 aaKnown RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 ZDHHC24Q6UX98 284 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 UNC5AQ6ZN44 842 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 NRROSQ86YC3 692 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 CLDN19Q8N6F1 224 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 BEND7Q8N7W2 519 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 GPR150Q8NGU9 434 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 BAHD1Q8TBE0 780 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 SEC14L1Q92503 715 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 CCM2Q9BSQ5 444 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 SPATS2LQ9NUQ6 558 aaKnown RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 IL1RAPL1Q9NZN1 696 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 MARCH4Q9P2E8 410 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 FAM8A1Q9UBU6 413 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 PCYT1BQ9Y5K3 369 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 ZNF106Q9H2Y7 1883 aaKnown RBP15.48■□□□□ 0.07
C9orf3-219ENST00000488186 DCDC2BA2VCK2 349 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 MGAT4DA6NG13 374 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 PDZK1P1A8MUH7 402 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 PRMT5O14744 637 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-219ENST00000488186 TNFSF14O43557 240 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 OR1I1O60431 355 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 SLU7O95391 586 aaKnown RBP15.48■□□□□ 0.07
C9orf3-219ENST00000488186 FTH1P02794 183 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 ERVK-10P10266 1014 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 ARNTP27540 789 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 MAGEA4P43358 317 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 SEMA3AQ14563 771 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 PACS1Q6VY07 963 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 CAPN12Q6ZSI9 719 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 LRRC6Q86X45 466 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 ZNF547Q8IVP9 402 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 CFAP206Q8IYR0 622 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 ARL10Q8N8L6 244 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 PNPLA1Q8N8W4 532 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 FAM181AQ8N9Y4 354 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 GSDMBQ8TAX9 411 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 NAT14Q8WUY8 206 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 CERS2Q96G23 380 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 APOLD1Q96LR9 279 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 PHACTR1Q9C0D0 580 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 CCDC68Q9H2F9 335 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 SLC23A2Q9UGH3 650 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 GNPTGQ9UJJ9 305 aa15.48■□□□□ 0.07
C9orf3-219ENST00000488186 TRBV23OR9-2A0A075B6M9 112 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 CPED1A4D0V7 1026 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 GSTM1P09488 218 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 CKMT2P17540 419 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 FMO4P31512 558 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 HALP42357 657 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 CARSP49589 748 aaKnown RBP15.47■□□□□ 0.07
C9orf3-219ENST00000488186 PRLHRP49683 370 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 CLCNKAP51800 687 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 EIF3BP55884 814 aaKnown RBP15.47■□□□□ 0.07
C9orf3-219ENST00000488186 GSTM4Q03013 218 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 CTBP1Q13363 440 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 FASTKD3Q14CZ7 662 aaKnown RBP15.47■□□□□ 0.07
C9orf3-219ENST00000488186 SEPT7Q16181 437 aaKnown RBP15.47■□□□□ 0.07
C9orf3-219ENST00000488186 CCDC157Q569K6 752 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 CILP2Q8IUL8 1156 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 LRRN4CLQ8ND94 238 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 OR2L2Q8NH16 312 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 FMO2Q99518 471 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 ZDHHC18Q9NUE0 388 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 INTS10Q9NVR2 710 aaKnown RBP15.47■□□□□ 0.07
C9orf3-219ENST00000488186 PADI4Q9UM07 663 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 PRSS21Q9Y6M0 314 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 KNTC1P50748 2209 aa15.47■□□□□ 0.07
C9orf3-219ENST00000488186 C17orf113A0A1B0GUU1 675 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 OR5K4A6NMS3 321 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 H3BMM5 538 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 TRIM16O95361 564 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 GIMD1P0DJR0 217 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 SIM1P81133 766 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-219ENST00000488186 CBLBQ13191 982 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 PROX2Q3B8N5 592 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 SYTL3Q4VX76 610 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 STEAP4Q687X5 459 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 C3orf62Q6ZUJ4 267 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 UNC5BQ8IZJ1 945 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-219ENST00000488186 OR6C4Q8NGE1 309 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 MAPK15Q8TD08 544 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 ELMO1Q92556 727 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 CCDC97Q96F63 343 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-219ENST00000488186 LINC00615Q96LM1 132 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-219ENST00000488186 C9orf72Q96LT7 481 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 STN1Q9H668 368 aaKnown RBP15.46■□□□□ 0.07
C9orf3-219ENST00000488186 PRDM8Q9NQV8 689 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 FBXO6Q9NRD1 293 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-219ENST00000488186 ZFATQ9P243 1243 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 TBC1D29Q9UFV1 150 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 FBXO5Q9UKT4 447 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 ACSL5Q9ULC5 683 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 CRYL1Q9Y2S2 319 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 PCDHB1Q9Y5F3 818 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 ST14Q9Y5Y6 855 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 LRP4O75096 1905 aa15.46■□□□□ 0.07
C9orf3-219ENST00000488186 PLXNB3Q9ULL4 1909 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms