RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 TSTD2Q5T7W7 516 aa23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 CCDC137Q6PK04 289 aaKnown RBP23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 SLITRK4Q8IW52 837 aa23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 PIANPQ8IYJ0 282 aa23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 OR13J1Q8NGT2 312 aa23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 OR10G6Q8NH81 332 aa23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 ZNF624Q9P2J8 865 aaPredicted RBP23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 WDR37Q9Y2I8 494 aa23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 AHCTF1Q8WYP5 2266 aa23.25■■□□□ 1.31
RHBDD3-205ENST00000488106 TRBV5-4A0A0C4DH59 114 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 TCRBV7S3A2A0A539 114 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 TMX2-CTNND1H3BSU7 103 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 CES2O00748 559 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 DUX1O43812 170 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 PHF2O75151 1096 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 VIPP01282 170 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 HGFP14210 728 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 HALP42357 657 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 TBC1D25Q3MII6 688 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 BCL7AQ4VC05 210 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 AGAP9Q5VTM2 703 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 ABRAXAS1Q6UWZ7 409 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 RAB11FIP2Q7L804 512 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 AVL9Q8NBF6 648 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 HDAC10Q969S8 669 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 SH3KBP1Q96B97 665 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 CXorf40BQ96DE9 158 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 ZNF778Q96MU6 729 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 DCBLD2Q96PD2 775 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 TBC1D10AQ9BXI6 508 aa23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 DNMT3AQ9Y6K1 912 aaPredicted RBP23.24■■□□□ 1.31
RHBDD3-205ENST00000488106 NBEAQ8NFP9 2946 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 SGTAO43765 313 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 KCNJ13O60928 360 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 ATP1B2P14415 290 aaPredicted RBP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 HOXB3P14651 431 aaPredicted RBP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 TCP1P17987 556 aaKnown RBP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 XRCC1P18887 633 aaPredicted RBP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 TPSB2P20231 275 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 MPSTP25325 297 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 RBMS1P29558 406 aaKnown RBP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 SLC19A1P41440 591 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 PRLHRP49683 370 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 GPLD1P80108 840 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 ZFP36L1Q07352 338 aaKnown RBP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 CLCA4Q14CN2 919 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 TPSAB1Q15661 275 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 DBN1Q16643 649 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 ZNF574Q6ZN55 896 aaPredicted RBP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 LSMEM2Q8N112 164 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 FBXO39Q8N4B4 442 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 RCBTB1Q8NDN9 531 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 HEXDCQ8WVB3 486 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 CAPZA3Q96KX2 299 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 CCDC74BQ96LY2 380 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 TMEM9Q9P0T7 183 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 LOXL2Q9Y4K0 774 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 PTPRQQ9UMZ3 2332 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 SDK2Q58EX2 2172 aa23.23■■□□□ 1.31
RHBDD3-205ENST00000488106 IGLV3-16A0A075B6K0 115 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 PRAMEF33A0A0G2JMD5 474 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 MGAT4DA6NG13 374 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 PLD2O14939 933 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 TNFSF15O95150 251 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 GOT2P00505 430 aaKnown RBP23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 PSMA3P25788 255 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 FOXN2P32314 431 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 CLPPQ16740 277 aaPredicted RBP23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 AFTPHQ6ULP2 937 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 WASH2PQ6VEQ5 465 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 ZNF534Q76KX8 674 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 OR6P1Q8NGX9 317 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 PRR11Q96HE9 360 aaPredicted RBP23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 ASCL3Q9NQ33 180 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 WASH6PQ9NQA3 447 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 POT1Q9NUX5 634 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 PCDHGA8Q9Y5G5 932 aa23.22■■□□□ 1.31
RHBDD3-205ENST00000488106 CHD6Q8TD26 2715 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 IGHV5-10-1A0A0J9YXX1 117 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 LILRA5A6NI73 299 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 DXOO77932 396 aaKnown RBP23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 MGAT1P26572 445 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 EPHA4P54764 986 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 PRAMEP78395 509 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 CFHR1Q03591 330 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 EIF3IQ13347 325 aaKnown RBP23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 KCNJ11Q14654 390 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 C16orf72Q14CZ0 275 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 PCID2Q5JVF3 399 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 TMEM26Q6ZUK4 368 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 NLRP9Q7RTR0 991 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 CLDN19Q8N6F1 224 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 GPR150Q8NGU9 434 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 OR2L2Q8NH16 312 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 GRK7Q8WTQ7 553 aa23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.21■■□□□ 1.31
RHBDD3-205ENST00000488106 ZNF578Q96N58 590 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms