RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 MRPL47Q9HD33 250 aaKnown RBP15.02■□□□□ -0
MCF2L-228ENST00000487354 ZNF711Q9Y462 761 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 DIDO1Q9BTC0 2240 aaKnown RBP15.02□□□□□ -0.01
MCF2L-228ENST00000487354 PDZD2O15018 2839 aa15.02□□□□□ -0.01
MCF2L-228ENST00000487354 SSU72P8A0A1W2PR75 194 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 TLCD2A6NGC4 264 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 AURKAO14965 403 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 VEGFDO43915 354 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 DPM1O60762 260 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 SCRG1O75711 98 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 TMEM63AO94886 807 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 IDSP22304 550 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 RORAP35398 523 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 RPS15P62841 145 aaKnown RBP15.01□□□□□ -0.01
MCF2L-228ENST00000487354 TUBB4BP68371 445 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 ACY1Q03154 408 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 ABRQ12979 859 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 TUBB2AQ13885 445 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 RPE65Q16518 533 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 ZNF789Q5FWF6 425 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 PLEKHS1Q5SXH7 462 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 CCDC183Q5T5S1 534 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 BPHLQ86WA6 291 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-228ENST00000487354 KMT5CQ86Y97 462 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 ZBTB2Q8N680 514 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 ENDOVQ8N8Q3 282 aaKnown RBP15.01□□□□□ -0.01
MCF2L-228ENST00000487354 GLIS1Q8NBF1 620 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 MR1Q95460 341 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 TADA1Q96BN2 335 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 HDAC11Q96DB2 347 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 SNRNP40Q96DI7 357 aaKnown RBP15.01□□□□□ -0.01
MCF2L-228ENST00000487354 TRIM11Q96F44 468 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 PPM1MQ96MI6 270 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 LRFN5Q96NI6 719 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 VPS35Q96QK1 796 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 TUBB2BQ9BVA1 445 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 SLC29A3Q9BZD2 475 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 SPO11Q9Y5K1 396 aa15.01□□□□□ -0.01
MCF2L-228ENST00000487354 OR5K3A6NET4 321 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 KCNK1O00180 336 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 CDK14O94921 469 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 SLC4A1P02730 911 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 SKILP12757 684 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 CTSCP53634 463 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 DMPKQ09013 629 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 ATP13A5Q4VNC0 1218 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 CRB2Q5IJ48 1285 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 FBXO38Q6PIJ6 1188 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 DSELQ8IZU8 1212 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 INPP5DQ92835 1189 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 ZNF670Q9BS34 389 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 THAP2Q9H0W7 228 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 MAGEE1Q9HCI5 957 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 SLAMF7Q9NQ25 335 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 LATS2Q9NRM7 1088 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 ASF1BQ9NVP2 202 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 TCFL5Q9UL49 500 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 DOCK10Q96BY6 2186 aa15□□□□□ -0.01
MCF2L-228ENST00000487354 CELSR1Q9NYQ6 3014 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 ZNF185O15231 689 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 GPR39O43194 453 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 RAB40ALP0C0E4 278 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 IFI35P80217 286 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-228ENST00000487354 HSD11B2P80365 405 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 PLEKHN1Q494U1 663 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-228ENST00000487354 DNTTIP2Q5QJE6 756 aaKnown RBP14.99□□□□□ -0.01
MCF2L-228ENST00000487354 CCDC122Q5T0U0 273 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 HGSNATQ68CP4 663 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 HPS6Q86YV9 775 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 TRAPPC5Q8IUR0 188 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 TMEM126BQ8IUX1 230 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 RHOT1Q8IXI2 618 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 ANKRD20A12PQ8NF67 263 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 IMP4Q96G21 291 aaKnown RBP14.99□□□□□ -0.01
MCF2L-228ENST00000487354 CD180Q99467 661 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 BARD1Q99728 777 aaKnown RBP14.99□□□□□ -0.01
MCF2L-228ENST00000487354 ADGRE3Q9BY15 652 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 CEP41Q9BYV8 373 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 ANAPC7Q9UJX3 599 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 BTRCQ9Y297 605 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 ANKRD12Q6UB98 2062 aa14.99□□□□□ -0.01
MCF2L-228ENST00000487354 AKAP9Q99996 3911 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 C2CD3Q4AC94 2353 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 A6NL46 340 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 LCA5LO95447 670 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 PRF1P14222 555 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 KPNA2P52292 529 aaKnown RBP14.98□□□□□ -0.01
MCF2L-228ENST00000487354 VAV2P52735 878 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 TAS2R40P59535 323 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 PPIDQ08752 370 aaKnown RBP14.98□□□□□ -0.01
MCF2L-228ENST00000487354 TMEM115Q12893 351 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-228ENST00000487354 RAPSNQ13702 412 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 ATP1A4Q13733 1029 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 DUS1LQ6P1R4 473 aaKnown RBP14.98□□□□□ -0.01
MCF2L-228ENST00000487354 NLNQ9BYT8 704 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 RTN4Q9NQC3 1192 aaKnown RBP14.98□□□□□ -0.01
MCF2L-228ENST00000487354 KCND1Q9NSA2 647 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 PCMTD2Q9NV79 361 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 GPR83Q9NYM4 423 aa14.98□□□□□ -0.01
MCF2L-228ENST00000487354 IP6K2Q9UHH9 426 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms