RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 HK2P52789 917 aa14□□□□□ -0.17
CUX1-209ENST00000487284 AQP5P55064 265 aa14□□□□□ -0.17
CUX1-209ENST00000487284 IL2P60568 153 aa14□□□□□ -0.17
CUX1-209ENST00000487284 ELP6Q0PNE2 266 aa14□□□□□ -0.17
CUX1-209ENST00000487284 RAVER1Q8IY67 606 aaKnown RBP14□□□□□ -0.17
CUX1-209ENST00000487284 LSMEM2Q8N112 164 aa14□□□□□ -0.17
CUX1-209ENST00000487284 PGBD3Q8N328 593 aa14□□□□□ -0.17
CUX1-209ENST00000487284 ZNF781Q8N8C0 355 aa14□□□□□ -0.17
CUX1-209ENST00000487284 RAB7BQ96AH8 199 aa14□□□□□ -0.17
CUX1-209ENST00000487284 FAM131CQ96AQ9 280 aa14□□□□□ -0.17
CUX1-209ENST00000487284 ERP27Q96DN0 273 aa14□□□□□ -0.17
CUX1-209ENST00000487284 L3HYPDHQ96EM0 354 aa14□□□□□ -0.17
CUX1-209ENST00000487284 TMEM237Q96Q45 408 aa14□□□□□ -0.17
CUX1-209ENST00000487284 WRAP53Q9BUR4 548 aaKnown RBP14□□□□□ -0.17
CUX1-209ENST00000487284 ILKAPQ9H0C8 392 aaPredicted RBP14□□□□□ -0.17
CUX1-209ENST00000487284 PNPOQ9NVS9 261 aa14□□□□□ -0.17
CUX1-209ENST00000487284 NCKIPSDQ9NZQ3 722 aa14□□□□□ -0.17
CUX1-209ENST00000487284 DLGAP2Q9P1A6 1054 aa14□□□□□ -0.17
CUX1-209ENST00000487284 HEY2Q9UBP5 337 aa14□□□□□ -0.17
CUX1-209ENST00000487284 TMPRSS11EQ9UL52 423 aa14□□□□□ -0.17
CUX1-209ENST00000487284 EPB41L3Q9Y2J2 1087 aaPredicted RBP14□□□□□ -0.17
CUX1-209ENST00000487284 FADS3Q9Y5Q0 445 aa14□□□□□ -0.17
CUX1-209ENST00000487284 PRSS21Q9Y6M0 314 aa14□□□□□ -0.17
CUX1-209ENST00000487284 DOCK9Q9BZ29 2069 aa14□□□□□ -0.17
CUX1-209ENST00000487284 TMEM221A6NGB7 291 aa14□□□□□ -0.17
CUX1-209ENST00000487284 IQCF5A8MTL0 148 aa14□□□□□ -0.17
CUX1-209ENST00000487284 H0Y858 1186 aa14□□□□□ -0.17
CUX1-209ENST00000487284 M0R296 226 aa14□□□□□ -0.17
CUX1-209ENST00000487284 NEMP1O14524 444 aa14□□□□□ -0.17
CUX1-209ENST00000487284 SMIM24O75264 130 aa14□□□□□ -0.17
CUX1-209ENST00000487284 TPBGLP0DKB5 382 aa14□□□□□ -0.17
CUX1-209ENST00000487284 MTHFD2P13995 350 aa14□□□□□ -0.17
CUX1-209ENST00000487284 AOC1P19801 751 aa14□□□□□ -0.17
CUX1-209ENST00000487284 NSG1P42857 185 aa14□□□□□ -0.17
CUX1-209ENST00000487284 LIG3P49916 1009 aa14□□□□□ -0.17
CUX1-209ENST00000487284 TPMTP51580 245 aa14□□□□□ -0.17
CUX1-209ENST00000487284 BNIP1Q12981 228 aa14□□□□□ -0.17
CUX1-209ENST00000487284 PRKAA1Q13131 559 aa14□□□□□ -0.17
CUX1-209ENST00000487284 ARL13AQ5H913 290 aaPredicted RBP14□□□□□ -0.17
CUX1-209ENST00000487284 TMEM31Q5JXX7 168 aa14□□□□□ -0.17
CUX1-209ENST00000487284 HENMT1Q5T8I9 393 aaKnown RBP14□□□□□ -0.17
CUX1-209ENST00000487284 LIPIQ6XZB0 460 aa14□□□□□ -0.17
CUX1-209ENST00000487284 Q6ZVL8 140 aa14□□□□□ -0.17
CUX1-209ENST00000487284 MAVSQ7Z434 540 aa14□□□□□ -0.17
CUX1-209ENST00000487284 TECPR1Q7Z6L1 1165 aa14□□□□□ -0.17
CUX1-209ENST00000487284 FAM124AQ86V42 546 aa14□□□□□ -0.17
CUX1-209ENST00000487284 KBTBD6Q86V97 674 aa14□□□□□ -0.17
CUX1-209ENST00000487284 CPNE9Q8IYJ1 553 aa14□□□□□ -0.17
CUX1-209ENST00000487284 CLDN19Q8N6F1 224 aa14□□□□□ -0.17
CUX1-209ENST00000487284 STAG3L4Q8TBR4 150 aa14□□□□□ -0.17
CUX1-209ENST00000487284 LKAAEAR1Q8TD35 194 aa14□□□□□ -0.17
CUX1-209ENST00000487284 INPP5DQ92835 1189 aa14□□□□□ -0.17
CUX1-209ENST00000487284 LINGO1Q96FE5 620 aa14□□□□□ -0.17
CUX1-209ENST00000487284 CNDP1Q96KN2 507 aa14□□□□□ -0.17
CUX1-209ENST00000487284 COPS8Q99627 209 aa14□□□□□ -0.17
CUX1-209ENST00000487284 FAM83DQ9H4H8 585 aa14□□□□□ -0.17
CUX1-209ENST00000487284 CYP4F12Q9HCS2 524 aa14□□□□□ -0.17
CUX1-209ENST00000487284 DNAJC28Q9NX36 388 aa14□□□□□ -0.17
CUX1-209ENST00000487284 EBF1Q9UH73 591 aa14□□□□□ -0.17
CUX1-209ENST00000487284 IKZF3Q9UKT9 509 aa14□□□□□ -0.17
CUX1-209ENST00000487284 TRPM6Q9BX84 2022 aa14□□□□□ -0.17
CUX1-209ENST00000487284 CACNA1IQ9P0X4 2223 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 HGSO14964 777 aaPredicted RBP13.99□□□□□ -0.17
CUX1-209ENST00000487284 AP1G1O43747 822 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 ELFN1P0C7U0 828 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 GM2AP17900 193 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 IMPDH1P20839 514 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 MPSTP25325 297 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 SERPINB3P29508 390 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 B4GALNT1Q00973 533 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 GALNT1Q10472 559 aaPredicted RBP13.99□□□□□ -0.17
CUX1-209ENST00000487284 TSNQ15631 228 aaKnown RBP13.99□□□□□ -0.17
CUX1-209ENST00000487284 TMEM52BQ4KMG9 183 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 FAM91A1Q658Y4 838 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 USP30Q70CQ3 517 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 CLNKQ7Z7G1 428 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 MTDHQ86UE4 582 aaKnown RBP13.99□□□□□ -0.17
CUX1-209ENST00000487284 NRSN1Q8IZ57 195 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 TRAM1L1Q8N609 369 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 CCNYL1Q8N7R7 359 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 OR14C36Q8NHC7 312 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 EEF1AKMT1Q8WVE0 214 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 FUBP1Q96AE4 644 aaKnown RBP13.99□□□□□ -0.17
CUX1-209ENST00000487284 MOCOSQ96EN8 888 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 SPATA16Q9BXB7 569 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 ACSS2Q9NR19 701 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 LATS2Q9NRM7 1088 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 CD84Q9UIB8 345 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 FZD4Q9ULV1 537 aa13.99□□□□□ -0.17
CUX1-209ENST00000487284 NPEPPSL1A6NEC2 478 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 UBXN8O00124 270 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 CDC7O00311 574 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 BTN3A1O00481 513 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 PLRG1O43660 514 aaKnown RBP13.98□□□□□ -0.17
CUX1-209ENST00000487284 MMP20O60882 483 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 APBB3O95704 486 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 ETV3P41162 512 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 CCR10P46092 362 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 SCTRP47872 440 aa13.98□□□□□ -0.17
CUX1-209ENST00000487284 CXCL12P48061 93 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms