RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ZNF106Q9H2Y7 1883 aaKnown RBP18.75■□□□□ 0.59
CLIP2-206ENST00000487091 OR52A4PA6NMU1 304 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 TOX3O15405 576 aaPredicted RBP18.74■□□□□ 0.59
CLIP2-206ENST00000487091 GPR39O43194 453 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 PRAMEF1O95521 474 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 CRTAMO95727 393 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 AMD1P17707 334 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 CA5AP35218 305 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 HALP42357 657 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 CTSCP53634 463 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 DRG2P55039 364 aaKnown RBP18.74■□□□□ 0.59
CLIP2-206ENST00000487091 CLCA4Q14CN2 919 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 LONRF2Q1L5Z9 754 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 ANKS6Q68DC2 871 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 XKR5Q6UX68 686 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 CEACAM20Q6UY09 585 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 C9orf72Q96LT7 481 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 APOL2Q9BQE5 337 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 TRIM10Q9UDY6 481 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 WDR37Q9Y2I8 494 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 PCDHGA4Q9Y5G9 962 aa18.74■□□□□ 0.59
CLIP2-206ENST00000487091 KLHL33A6NCF5 533 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 DDX3YO15523 660 aaKnown RBP18.73■□□□□ 0.59
CLIP2-206ENST00000487091 SRP72O76094 671 aaKnown RBP18.73■□□□□ 0.59
CLIP2-206ENST00000487091 ITGB2P05107 769 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 PTMAP06454 111 aaKnown RBP18.73■□□□□ 0.59
CLIP2-206ENST00000487091 TYRP1P17643 537 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 MSH3P20585 1137 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 KLF1Q13351 362 aaPredicted RBP18.73■□□□□ 0.59
CLIP2-206ENST00000487091 OLIG2Q13516 323 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 PARP6Q2NL67 630 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 DENND5AQ6IQ26 1287 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 RTP4Q96DX8 246 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 TBL1YQ9BQ87 522 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 SPRY4Q9C004 299 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 ASB8Q9H765 288 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 KLHL3Q9UH77 587 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 FKBPLQ9UIM3 349 aa18.73■□□□□ 0.59
CLIP2-206ENST00000487091 OR2AG2A6NM03 316 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 AGAP14A8MT82 685 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 FTCDO95954 541 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 WT1P19544 449 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-206ENST00000487091 AKT1P31749 480 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 GFERP55789 205 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 XIAPP98170 497 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 LY6DQ14210 128 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 GPR18Q14330 331 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 METRNLQ641Q3 311 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 RNF10Q8N5U6 811 aaKnown RBP18.72■□□□□ 0.59
CLIP2-206ENST00000487091 IL22RA1Q8N6P7 574 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 UBE2Q2Q8WVN8 375 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 JPH3Q8WXH2 748 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-206ENST00000487091 MED8Q96G25 268 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 HES6Q96HZ4 224 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 DESI2Q9BSY9 194 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 RAB33BQ9H082 229 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 SIDT1Q9NXL6 827 aaKnown RBP18.72■□□□□ 0.59
CLIP2-206ENST00000487091 EPHA6Q9UF33 1036 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 PILRAQ9UKJ1 303 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 PACSIN2Q9UNF0 486 aaPredicted RBP18.72■□□□□ 0.59
CLIP2-206ENST00000487091 KCTD3Q9Y597 815 aa18.72■□□□□ 0.59
CLIP2-206ENST00000487091 PIEZO2Q9H5I5 2752 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 CFAP46Q8IYW2 2715 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 A0A0U1RQJ8 604 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 MGAT4DA6NG13 374 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 POLR1CO15160 346 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-206ENST00000487091 CAPN5O15484 640 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-206ENST00000487091 RAD1O60671 282 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 HADHAP40939 763 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 CAPZBP47756 277 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 ZNF140P52738 457 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-206ENST00000487091 RPE65Q16518 533 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 KCTD11Q693B1 232 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 FAM83HQ6ZRV2 1179 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-206ENST00000487091 ARHGEF18Q6ZSZ5 1173 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 CACNA2D3Q8IZS8 1091 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 FAM71DQ8N9W8 422 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 SPC24Q8NBT2 197 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 OR13C4Q8NGS5 318 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 TGM7Q96PF1 710 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 SEMA4CQ9C0C4 833 aa18.71■□□□□ 0.59
CLIP2-206ENST00000487091 MAP4P27816 1152 aaKnown RBP18.7■□□□□ 0.58
CLIP2-206ENST00000487091 NFE2L1Q14494 772 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 SPARCL1Q14515 664 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 LINC00303Q3SY05 128 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 BCL7AQ4VC05 210 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 FNBP1LQ5T0N5 605 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 PRSS42Q7Z5A4 293 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 BEND7Q8N7W2 519 aaPredicted RBP18.7■□□□□ 0.58
CLIP2-206ENST00000487091 OR2L2Q8NH16 312 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 SLC35B2Q8TB61 432 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 HEXDCQ8WVB3 486 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 ULK4Q96C45 1275 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 ZDHHC12Q96GR4 267 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 LINC00615Q96LM1 132 aaPredicted RBP18.7■□□□□ 0.58
CLIP2-206ENST00000487091 CTRCQ99895 268 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 ZNF768Q9H5H4 540 aaKnown RBP18.7■□□□□ 0.58
CLIP2-206ENST00000487091 APMAPQ9HDC9 416 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 ACSL5Q9ULC5 683 aa18.7■□□□□ 0.58
CLIP2-206ENST00000487091 TMEM184BQ9Y519 407 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms