RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HFE2Q6ZVN8 426 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 LDB1Q86U70 411 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PIM3Q86V86 326 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 BPHLQ86WA6 291 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SLC38A6Q8IZM9 456 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SVOPLQ8N434 492 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 RYBPQ8N488 228 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 WNT8BQ93098 351 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PYCR2Q96C36 320 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 DMRTB1Q96MA1 342 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 DEPDC7Q96QD5 511 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 SH3GL1Q99961 368 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 REXO4Q9GZR2 422 aaKnown RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 IRF2BPLQ9H1B7 796 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 ACOT13Q9NPJ3 140 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 PRDM8Q9NQV8 689 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 AIG1Q9NVV5 245 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 POLR3BQ9NW08 1133 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 TMEFF2Q9UIK5 374 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 AAR2Q9Y312 384 aaKnown RBP10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CITO14578 2027 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 LRRC37A2A6NM11 1700 aa10.53□□□□□ -0.72
CCDC171-208ENST00000486641 CENPXA8MT69 81 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 A8MV72 311 aaPredicted RBP10.52□□□□□ -0.72
CCDC171-208ENST00000486641 ZW10O43264 779 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 GAS2O43903 313 aaKnown RBP10.52□□□□□ -0.72
CCDC171-208ENST00000486641 CACNG3O60359 315 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 MITFO75030 526 aaPredicted RBP10.52□□□□□ -0.72
CCDC171-208ENST00000486641 JUNDP17535 347 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 PFKLP17858 780 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 CLCN5P51795 746 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 FCGRTP55899 365 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 NFKB2Q00653 900 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 PFKFB4Q16877 469 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 PLEKHG6Q3KR16 790 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 ZFP69Q49AA0 526 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 TPRG1LQ5T0D9 272 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 KIAA0930Q6ICG6 404 aaPredicted RBP10.52□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF544Q6NX49 715 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 SCIMPQ6UWF3 145 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 DLEU7Q6UYE1 221 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 ARHGAP36Q6ZRI8 547 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 SPATA19Q7Z5L4 167 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 NECAB2Q7Z6G3 386 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 GALNT12Q8IXK2 581 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 UBQLNLQ8IYU4 475 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 SIMC1Q8NDZ2 872 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 SLC2A14Q8TDB8 520 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 NUDT8Q8WV74 236 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 TSPAN17Q96FV3 270 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 ASB2Q96Q27 587 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 UGT2B28Q9BY64 529 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 CLPBQ9H078 707 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 ACAD9Q9H845 621 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 SMPD4Q9NXE4 827 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 NPAP1Q9NZP6 1156 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 TPRKBQ9Y3C4 175 aa10.52□□□□□ -0.72
CCDC171-208ENST00000486641 ZSCAN5BA6NJL1 495 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 CLDN24A6NM45 220 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 EVPLLA8MZ36 301 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 PGLSO95336 258 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 WISP3O95389 354 aaPredicted RBP10.52□□□□□ -0.73
CCDC171-208ENST00000486641 LCKP06239 509 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 FYNP06241 537 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 PRR35P0CG20 571 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 DCTP40126 519 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF45Q02386 682 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 FADDQ13158 208 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 GBX1Q14549 363 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 SMN1Q16637 294 aaKnown RBP10.52□□□□□ -0.73
CCDC171-208ENST00000486641 LY6KQ17RY6 165 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 NXNL2Q5VZ03 156 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 NEK5Q6P3R8 708 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 GALNT5Q7Z7M9 940 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 KLHDC8BQ8IXV7 354 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 SPERTQ8NA61 448 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF540Q8NDQ6 660 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 ELMO1Q92556 727 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF419Q96HQ0 510 aaPredicted RBP10.52□□□□□ -0.73
CCDC171-208ENST00000486641 ST6GAL2Q96JF0 529 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 FAM167AQ96KS9 214 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 PRMT7Q9NVM4 692 aaPredicted RBP10.52□□□□□ -0.73
CCDC171-208ENST00000486641 LIMD1Q9UGP4 676 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 U3KQV3 271 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 LCTP09848 1927 aa10.52□□□□□ -0.73
CCDC171-208ENST00000486641 EVPLQ92817 2033 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 PMPCBO75439 489 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 DBTP11182 482 aaKnown RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 HOXD8P13378 290 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 IFNA8P32881 189 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 CLK1P49759 484 aaKnown RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 TUBA1BP68363 451 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 PLIN5Q00G26 463 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 GRIK2Q13002 908 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 IL18R1Q13478 541 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 SIM2Q14190 667 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 FBXO48Q5FWF7 155 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 NOMO2Q5JPE7 1267 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 INTS6LQ5JSJ4 861 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms