RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TBC1D10AQ9BXI6 508 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 UCK1Q9HA47 277 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 ARNT2Q9HBZ2 717 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 PIH1D1Q9NWS0 290 aaKnown RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 SCHIP1Q9P0W5 487 aaPredicted RBP12.66□□□□□ -0.38
CHMP3-208ENST00000486404 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 SDK2Q58EX2 2172 aa12.66□□□□□ -0.38
CHMP3-208ENST00000486404 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 KLHL33A6NCF5 533 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 EFCAB7A8K855 629 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 A8MU76 341 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 CCL22O00626 93 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 NVLO15381 856 aaKnown RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 POP7O75817 140 aaKnown RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 UBXN7O94888 489 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 SLC35G4P0C7Q5 338 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 LIPCP11150 499 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 AMD1P17707 334 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 TPH1P17752 444 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 CD82P27701 267 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 DMPKQ09013 629 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 CDH17Q12864 832 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 CLN3Q13286 438 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 NFE2L1Q14494 772 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 PLCL1Q15111 1095 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 OASLQ15646 514 aaKnown RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 WASH2PQ6VEQ5 465 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 ZNF574Q6ZN55 896 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 ZNF662Q6ZS27 426 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 TAS2R42Q7RTR8 314 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 GSTA5Q7RTV2 222 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 GPR155Q7Z3F1 870 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 C11orf96Q7Z7L8 435 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 PLXDC1Q8IUK5 500 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 KLHDC8BQ8IXV7 354 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 NXPE1Q8N323 547 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 BEND7Q8N7W2 519 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 UBL7Q96S82 380 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 C19orf43Q9BQ61 176 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 PRORYQ9H606 182 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 VPS37BQ9H9H4 285 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 CPNE5Q9HCH3 593 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 WASH6PQ9NQA3 447 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 IMP3Q9NV31 184 aaKnown RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 FOXJ2Q9P0K8 574 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 PSMD13Q9UNM6 376 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 PCDHB11Q9Y5F2 797 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 DNMT3AQ9Y6K1 912 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-208ENST00000486404 IGSF10Q6WRI0 2623 aa12.65□□□□□ -0.38
CHMP3-208ENST00000486404 MN1Q10571 1320 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-208ENST00000486404 AHCTF1Q8WYP5 2266 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 TEX51A0A1B0GUA7 166 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 GOLGA6L3A6NEY3 463 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 LDB2O43679 373 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 CEP104O60308 925 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 FGGP02679 453 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 CCL4P13236 92 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 BRAFP15056 766 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 TYRP1P17643 537 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 CA5AP35218 305 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 SLC19A1P41440 591 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 CAPZBP47756 277 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 RAB15P59190 212 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 XIAPP98170 497 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 CFHR1Q03591 330 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 LAMB3Q13751 1172 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 GPR18Q14330 331 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 GPR33Q49SQ1 333 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 BCL7AQ4VC05 210 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 ARHGAP40Q5TG30 622 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 ABRAXAS1Q6UWZ7 409 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 CCDC81Q6ZN84 652 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 FAM83HQ6ZRV2 1179 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-208ENST00000486404 OR52K1Q8NGK4 314 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 ART4Q93070 314 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 SGF29Q96ES7 293 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 TGM7Q96PF1 710 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 TAAR9Q96RI9 348 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 GRPEL1Q9HAV7 217 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 RAB6BQ9NRW1 208 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 NLE1Q9NVX2 485 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-208ENST00000486404 SLC39A1Q9NY26 324 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 PAK5Q9P286 719 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 ZNF624Q9P2J8 865 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-208ENST00000486404 ACSL6Q9UKU0 697 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 ZKSCAN5Q9Y2L8 839 aa12.64□□□□□ -0.39
CHMP3-208ENST00000486404 HEATR9A2RTY3 570 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 MGAT4DA6NG13 374 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 PRR19A6NJB7 356 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 C9orf172C9J069 976 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 STMND1H3BQB6 276 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 RASSF9O75901 435 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 APRTP07741 180 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 MTHFD1P11586 935 aaKnown RBP12.63□□□□□ -0.39
CHMP3-208ENST00000486404 ACRV1P26436 265 aa12.63□□□□□ -0.39
CHMP3-208ENST00000486404 PRLHRP49683 370 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms