RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 UGT1A7Q9HAW7 530 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 UGT1A10Q9HAW8 530 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 UGT1A8Q9HAW9 530 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 EPB41L5Q9HCM4 733 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 BPIFA1Q9NP55 256 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SLC40A1Q9NP59 571 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 FBXO8Q9NRD0 319 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 POT1Q9NUX5 634 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SEMA5BQ9P283 1151 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 ZNF624Q9P2J8 865 aaPredicted RBP6.89□□□□□ -1.31
VPS50-218ENST00000485994 CPNE7Q9UBL6 633 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 TRIM10Q9UDY6 481 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 ATXN7L1Q9ULK2 861 aaPredicted RBP6.89□□□□□ -1.31
VPS50-218ENST00000485994 GUCA1BQ9UMX6 200 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 PACSIN2Q9UNF0 486 aaPredicted RBP6.89□□□□□ -1.31
VPS50-218ENST00000485994 ZKSCAN5Q9Y2L8 839 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 PRKAB1Q9Y478 270 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 LOXL2Q9Y4K0 774 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 CAPN6Q9Y6Q1 641 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SDK2Q58EX2 2172 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 LOC400499M0QZD8 3231 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SPTBP11277 2137 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 IGLV3-16A0A075B6K0 115 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 TRBV23OR9-2A0A075B6M9 112 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 MGAT4DA6NG13 374 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 MROH6A6NGR9 719 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 K7ENP7 123 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 LDB2O43679 373 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 LIASO43766 372 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 DUX1O43812 170 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 POP7O75817 140 aaKnown RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 SRP72O76094 671 aaKnown RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 SUN1O94901 812 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 METTL18O95568 372 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 AP2A1O95782 977 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 VIPP01282 170 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 CCDC175P0C221 793 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 ANKRD34CP0C6C1 535 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 JMJD7P0C870 316 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 FGF3P11487 239 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 BRAFP15056 766 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 CSTF2P33240 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS50-218ENST00000485994 TMPRSS3P57727 454 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 MC2RQ01718 297 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 CCDC173Q0VFZ6 552 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 NFATC2Q13469 925 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 GTF2H3Q13889 308 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 C16orf72Q14CZ0 275 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 RPS6KA1Q15418 735 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 INSCQ1MX18 579 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 SKIDA1Q1XH10 827 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 AMZ1Q400G9 498 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 BCL7AQ4VC05 210 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 ZNF648Q5T619 568 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 GPRC6AQ5T6X5 926 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 SEL1L2Q5TEA6 688 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 ARMC3Q5W041 872 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 ALS2CLQ60I27 953 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 INO80CQ6PI98 192 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 TMEM220Q6QAJ8 160 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 SNX20Q7Z614 316 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 AMZ2Q86W34 360 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 SLC13A5Q86YT5 568 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 PLXDC1Q8IUK5 500 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 RASGEF1AQ8N9B8 481 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 FAM71DQ8N9W8 422 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 TRIM58Q8NG06 486 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 OR2L2Q8NH16 312 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 STYXQ8WUJ0 223 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 PEX13Q92968 403 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 AHCYL2Q96HN2 611 aaKnown RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 CDKN2AIPNLQ96HQ2 116 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 TEFMQ96QE5 360 aaKnown RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 UBL7Q96S82 380 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 NUDT22Q9BRQ3 303 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 DESI2Q9BSY9 194 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 TMEM121Q9BTD3 319 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 FICDQ9BVA6 458 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 DDA1Q9BW61 102 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 ASPSCR1Q9BZE9 553 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 FOXP3Q9BZS1 431 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 ASB8Q9H765 288 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 SUDS3Q9H7L9 328 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 RDH14Q9HBH5 336 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 PRDM8Q9NQV8 689 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 HOMER3Q9NSC5 361 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 NLE1Q9NVX2 485 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 SCHIP1Q9P0W5 487 aaPredicted RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 ACSL5Q9ULC5 683 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 KCNK6Q9Y257 313 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 R3HDM2Q9Y2K5 976 aaKnown RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 ARL5AQ9Y689 179 aa6.88□□□□□ -1.31
VPS50-218ENST00000485994 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
VPS50-218ENST00000485994 MN1Q10571 1320 aaPredicted RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 TCRBV7S2A1N4TA0A589 114 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 C9orf172C9J069 976 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 AP3B1O00203 1094 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 KLK10O43240 276 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 EFSO43281 561 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 SGTAO43765 313 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms