RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PDIA2Q13087 525 aaKnown RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 THOC5Q13769 683 aaKnown RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 HLTFQ14527 1009 aaKnown RBP eCLIP11.64□□□□□ -0.55
HPS4-214ENST00000485842 CRYMQ14894 314 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 LONRF1Q17RB8 773 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 DNTTIP2Q5QJE6 756 aaKnown RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 MRNIPQ6NTE8 343 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 PACS1Q6VY07 963 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 FAM83HQ6ZRV2 1179 aaPredicted RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 TMEM135Q86UB9 458 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 ANKMY2Q8IV38 441 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 IGDCC3Q8IVU1 814 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 ARL14Q8N4G2 192 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 CHCHD4Q8N4Q1 142 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 MMGT1Q8N4V1 131 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 CEP112Q8N8E3 955 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
HPS4-214ENST00000485842 MAPK15Q8TD08 544 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 SLC37A2Q8TED4 501 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 SGSM3Q96HU1 749 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 EBNA1BP2Q99848 306 aaKnown RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 CCDC3Q9BQI4 270 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 CARD6Q9BX69 1037 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 C20orf96Q9NUD7 363 aaPredicted RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 LRIT1Q9P2V4 623 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 PSMD13Q9UNM6 376 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 PCDHGA1Q9Y5H4 931 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 DNMT3AQ9Y6K1 912 aaPredicted RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 RNF215Q9Y6U7 377 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 RP1P56715 2156 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 UBA6A0AVT1 1052 aaPredicted RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 A6NCN8 305 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 PRR19A6NJB7 356 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 RHPN2P1A8MT19 583 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 HYAL3O43820 417 aaPredicted RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 AP2A2O94973 939 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 TOP3BO95985 862 aaKnown RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 ADRB1P08588 477 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 F7P08709 466 aaPredicted RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 OR56A5P0C7T3 313 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 GLB1P16278 677 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ITGB6P18564 788 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 OGNP20774 298 aaKnown RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 PLTPP55058 493 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 EIF3BP55884 814 aaKnown RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 GUCY2DQ02846 1103 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ILKQ13418 452 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 FASTKD3Q14CZ7 662 aaKnown RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 TRADDQ15628 312 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 SPANXN3Q5MJ09 141 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ZNF470Q6ECI4 717 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 NEPROQ6NW34 567 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 CENPUQ71F23 418 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ERMP1Q7Z2K6 904 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 SDCCAG8Q86SQ7 713 aaPredicted RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 KCNMB4Q86W47 210 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 CCDC25Q86WR0 208 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ZNF761Q86XN6 746 aaPredicted RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 TRIM48Q8IWZ4 208 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 UNC5BQ8IZJ1 945 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 SFRP1Q8N474 314 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 Q8N9G6 341 aaPredicted RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 OR6C4Q8NGE1 309 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 OR2L2Q8NH16 312 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 HM13Q8TCT9 377 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ADAMTS14Q8WXS8 1223 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 CCM2Q9BSQ5 444 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 NAT9Q9BTE0 207 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ABCG4Q9H172 646 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 STN1Q9H668 368 aaKnown RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 VPS37BQ9H9H4 285 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 SCHIP1Q9P0W5 487 aaPredicted RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 ZC3H7BQ9UGR2 993 aaKnown RBP11.63□□□□□ -0.55
HPS4-214ENST00000485842 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 DNAH14Q0VDD8 3507 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 ASXL3Q9C0F0 2248 aa11.63□□□□□ -0.55
HPS4-214ENST00000485842 KIR2DS5A0A0G2JLQ3 304 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 A0A0G2JNG1 304 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 KIR2DS3K7RE56 304 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 QSOX1O00391 747 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 PRMT5O14744 637 aaPredicted RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 PFDN6O15212 129 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 NUDT21O43809 227 aaKnown RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 OPA1O60313 960 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 KCNJ13O60928 360 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 DKK1O94907 266 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 TRIM16O95361 564 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 TTC4O95801 387 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 FTH1P02794 183 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 GP1BAP07359 652 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 SPINK2P20155 84 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 HALP42357 657 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 PPM1FP49593 454 aaPredicted RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 E2F1Q01094 437 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 HHEXQ03014 270 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 CAV1Q03135 178 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 DMPKQ09013 629 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 BOP1Q14137 746 aaKnown RBP11.62□□□□□ -0.55
HPS4-214ENST00000485842 KIR2DS5Q14953 304 aa11.62□□□□□ -0.55
HPS4-214ENST00000485842 BRD3Q15059 726 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms