RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TMEM220Q6QAJ8 160 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 FAM92BQ6ZTR7 304 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 PRSS42Q7Z5A4 293 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 RASGRP3Q8IV61 690 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 RASGEF1AQ8N9B8 481 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 DDHD1Q8NEL9 900 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 RAB33BQ9H082 229 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 EPHA6Q9UF33 1036 aa16.82■□□□□ 0.28
SMC4-216ENST00000485645 DNMT3AQ9Y6K1 912 aaPredicted RBP16.82■□□□□ 0.28
SMC4-216ENST00000485645 STX7O15400 261 aaKnown RBP16.81■□□□□ 0.28
SMC4-216ENST00000485645 GPR39O43194 453 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 KIF1CO43896 1103 aaKnown RBP16.81■□□□□ 0.28
SMC4-216ENST00000485645 LCA5LO95447 670 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 ZNF28P17035 718 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 TCN2P20062 427 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 MARCKSL1P49006 195 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 CTSCP53634 463 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 DMPKQ09013 629 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 XRCC4Q13426 336 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 GPRC6AQ5T6X5 926 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 C11orf63Q6NUN7 778 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 C16orf46Q6P387 395 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 C6orf15Q6UXA7 325 aaPredicted RBP16.81■□□□□ 0.28
SMC4-216ENST00000485645 BBS12Q6ZW61 710 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 TC2NQ8N9U0 490 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 KLHL6Q8WZ60 621 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 HEMGNQ9BXL5 484 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 LUC7LQ9NQ29 371 aaKnown RBP16.81■□□□□ 0.28
SMC4-216ENST00000485645 PSMD13Q9UNM6 376 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 PCDHA13Q9Y5I0 950 aa16.81■□□□□ 0.28
SMC4-216ENST00000485645 ZNF106Q9H2Y7 1883 aaKnown RBP16.81■□□□□ 0.28
SMC4-216ENST00000485645 OR2AG2A6NM03 316 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 H7C0C1 242 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 APOC4-APOC2K7ER74 178 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 NDUFA10O95299 355 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 APOC2P02655 101 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 FECHP22830 423 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 RBL1P28749 1068 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 OAS2P29728 719 aaKnown RBP16.8■□□□□ 0.28
SMC4-216ENST00000485645 CA5AP35218 305 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 DLSTP36957 453 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 ATP5OP48047 213 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 GEMP55040 296 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 SPA17Q15506 151 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 RPE65Q16518 533 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 LONRF2Q1L5Z9 754 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 DEFB109BQ30KR1 87 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 CRTC2Q53ET0 693 aaPredicted RBP16.8■□□□□ 0.28
SMC4-216ENST00000485645 CCDC181Q5TID7 509 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 ITPRIPL1Q6GPH6 555 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 CYB5D1Q6P9G0 228 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 KLHL35Q6PF15 583 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 DAAM2Q86T65 1068 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 PTRH1Q86Y79 214 aaKnown RBP16.8■□□□□ 0.28
SMC4-216ENST00000485645 CCDC170Q8IYT3 715 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 GALNT6Q8NCL4 622 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 ZNF398Q8TD17 642 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 APOBEC4Q8WW27 367 aaKnown RBP16.8■□□□□ 0.28
SMC4-216ENST00000485645 KRT35Q92764 455 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 RNF31Q96EP0 1072 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 STAMBPL1Q96FJ0 436 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 ELMO2Q96JJ3 720 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 ZNF514Q96K75 400 aaPredicted RBP16.8■□□□□ 0.28
SMC4-216ENST00000485645 FERMT1Q9BQL6 677 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 TRIM5Q9C035 493 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 PCDHB3Q9Y5E6 796 aa16.8■□□□□ 0.28
SMC4-216ENST00000485645 MRPS18BQ9Y676 258 aaKnown RBP16.8■□□□□ 0.28
SMC4-216ENST00000485645 C2orf81A6NN90 581 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 GAPDHSO14556 408 aaPredicted RBP16.79■□□□□ 0.28
SMC4-216ENST00000485645 SPAG6O75602 509 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 ANXA9O76027 345 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 KIAA0754O94854 1291 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 AGTP01019 485 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 FGF5P12034 268 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 NELFEP18615 380 aaKnown RBP16.79■□□□□ 0.28
SMC4-216ENST00000485645 MSH3P20585 1137 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 LPOP22079 712 aaPredicted RBP16.79■□□□□ 0.28
SMC4-216ENST00000485645 F8A1P23610 371 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 PBLDP30039 288 aaPredicted RBP16.79■□□□□ 0.28
SMC4-216ENST00000485645 AKT1P31749 480 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 CYLC1P35663 651 aaPredicted RBP16.79■□□□□ 0.28
SMC4-216ENST00000485645 COPS2P61201 443 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 NFE2L1Q14494 772 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 SARM1Q6SZW1 724 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 FAM83HQ6ZRV2 1179 aaPredicted RBP16.79■□□□□ 0.28
SMC4-216ENST00000485645 PPP1R3BQ86XI6 285 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 GPR150Q8NGU9 434 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 C9orf43Q8TAL5 461 aaPredicted RBP16.79■□□□□ 0.28
SMC4-216ENST00000485645 FICDQ9BVA6 458 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 GBA3Q9H227 469 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 C10orf88Q9H8K7 445 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 SMOXQ9NWM0 555 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 CROTQ9UKG9 612 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 ARL5AQ9Y689 179 aa16.79■□□□□ 0.28
SMC4-216ENST00000485645 PRAMEF1O95521 474 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 CCNYL3P0C7X3 344 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 TLE1Q04724 770 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 SEPT6Q14141 434 aa16.78■□□□□ 0.28
SMC4-216ENST00000485645 PTPRCAPQ14761 206 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms