RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 NAGSQ8N159 534 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 BBOF1Q8ND07 529 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 BAHD1Q8TBE0 780 aaPredicted RBP11.68□□□□□ -0.54
APTX-227ENST00000485479 DTX3LQ8TDB6 740 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 SEC14L1Q92503 715 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 GSDMCQ9BYG8 508 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 RABGEF1Q9UJ41 708 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 PCDHGB2Q9Y5G2 931 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 IGLV3-16A0A075B6K0 115 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 PDZK1P1A8MUH7 402 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 E7ESA3 106 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 AGRPO00253 132 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 KMOO15229 486 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 PAMP19021 973 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 FMO4P31512 558 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 DAB2P98082 770 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 THOC5Q13769 683 aaKnown RBP11.68□□□□□ -0.54
APTX-227ENST00000485479 DUS1LQ6P1R4 473 aaKnown RBP11.68□□□□□ -0.54
APTX-227ENST00000485479 MARCH9Q86YJ5 346 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 CILP2Q8IUL8 1156 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 FSTL5Q8N475 847 aaPredicted RBP11.68□□□□□ -0.54
APTX-227ENST00000485479 ZDHHC1Q8WTX9 485 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 PEX13Q92968 403 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.68□□□□□ -0.54
APTX-227ENST00000485479 TOR4AQ9NXH8 423 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 DLL3Q9NYJ7 618 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 FAM169AQ9Y6X4 670 aa11.68□□□□□ -0.54
APTX-227ENST00000485479 BHMG1C9JSJ3 638 aaPredicted RBP11.67□□□□□ -0.54
APTX-227ENST00000485479 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 NOBOXO60393 691 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 NIPSNAP2O75323 286 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 NDUFS3O75489 264 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 KCNK5O95279 499 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 TRIM16O95361 564 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 LDOC1O95751 146 aaPredicted RBP11.67□□□□□ -0.54
APTX-227ENST00000485479 MYBL2P10244 700 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 RALBP11234 206 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 BRAFP15056 766 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 NSG1P42857 185 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 PRLHRP49683 370 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 BOP1Q14137 746 aaKnown RBP11.67□□□□□ -0.54
APTX-227ENST00000485479 EFTUD2Q15029 972 aaKnown RBP eCLIP11.67□□□□□ -0.54
APTX-227ENST00000485479 PROX2Q3B8N5 592 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 CTSL3PQ5NE16 218 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 PERM1Q5SV97 790 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 SLCO6A1Q86UG4 719 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 AMZ2Q86W34 360 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 CFAP206Q8IYR0 622 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 PYROXD1Q8WU10 500 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 JPH3Q8WXH2 748 aaPredicted RBP11.67□□□□□ -0.54
APTX-227ENST00000485479 CERS2Q96G23 380 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 NRTNQ99748 197 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 RMI1Q9H9A7 625 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 SMYD2Q9NRG4 433 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 GALPQ9UBC7 116 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 PSAT1Q9Y617 370 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 FRYQ5TBA9 3013 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 MAGEB16A2A368 324 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 HAUS5O94927 633 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
APTX-227ENST00000485479 ALPPL2P10696 532 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 PDHA2P29803 388 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 ID4P47928 161 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 GPX6P59796 221 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 PPM1JQ5JR12 505 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 ZCCHC8Q6NZY4 707 aaKnown RBP11.67□□□□□ -0.54
APTX-227ENST00000485479 CNSTQ6PJW8 725 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 SLC37A2Q8TED4 501 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 NDNQ99608 321 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 C19orf43Q9BQ61 176 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 SYNDIG1Q9H7V2 258 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 SARS2Q9NP81 518 aaKnown RBP11.67□□□□□ -0.54
APTX-227ENST00000485479 CSNK1G3Q9Y6M4 447 aa11.67□□□□□ -0.54
APTX-227ENST00000485479 SMAPO00193 183 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 FAM153BP0C7A2 387 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 GABRB3P28472 473 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 MAGEA4P43358 317 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 TTPAP49638 278 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 CLCNKAP51800 687 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 LRP8Q14114 963 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 NAA30Q147X3 362 aaPredicted RBP11.66□□□□□ -0.54
APTX-227ENST00000485479 CLCA4Q14CN2 919 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 TYSND1Q2T9J0 566 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 FAM153CQ494X1 144 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 GLE1Q53GS7 698 aaKnown RBP11.66□□□□□ -0.54
APTX-227ENST00000485479 SPANXN3Q5MJ09 141 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 MRNIPQ6NTE8 343 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 PALM2Q8IXS6 379 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 ARL10Q8N8L6 244 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 Q8N9G6 341 aaPredicted RBP11.66□□□□□ -0.54
APTX-227ENST00000485479 UHMK1Q8TAS1 419 aaKnown RBP11.66□□□□□ -0.54
APTX-227ENST00000485479 SCG3Q8WXD2 468 aaKnown RBP11.66□□□□□ -0.54
APTX-227ENST00000485479 ELMO1Q92556 727 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 LPGAT1Q92604 370 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 BIRC8Q96P09 236 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 RTKNQ9BST9 563 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 DUSP23Q9BVJ7 150 aa11.66□□□□□ -0.54
APTX-227ENST00000485479 SLC32A1Q9H598 525 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms