RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZNF28P17035 718 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 NELFEP18615 380 aaKnown RBP11.23□□□□□ -0.61
SCFD1-206ENST00000484733 CHRNA4P43681 627 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 GEMP55040 296 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 COPS2P61201 443 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 RPE65Q16518 533 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 KLHL35Q6PF15 583 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 KMT5CQ86Y97 462 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UNC5BQ8IZJ1 945 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 SLC25A41Q8N5S1 370 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 CALR3Q96L12 384 aaKnown RBP11.23□□□□□ -0.61
SCFD1-206ENST00000484733 EFR3BQ9Y2G0 817 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UGT1A9O60656 530 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 PYGMP11217 842 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UGT1A6P19224 532 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UGT1A1P22309 533 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UGT1A4P22310 534 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 SEPHS1P49903 392 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 CTSCP53634 463 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 DRG2P55039 364 aaKnown RBP11.23□□□□□ -0.61
SCFD1-206ENST00000484733 SH3BP2P78314 561 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 GPRC6AQ5T6X5 926 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 METRNLQ641Q3 311 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 ZC3H18Q86VM9 953 aaKnown RBP11.23□□□□□ -0.61
SCFD1-206ENST00000484733 CCDC170Q8IYT3 715 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 C9orf43Q8TAL5 461 aaPredicted RBP11.23□□□□□ -0.61
SCFD1-206ENST00000484733 CD180Q99467 661 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 TRIM4Q9C037 500 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UGT1A7Q9HAW7 530 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UGT1A10Q9HAW8 530 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 UGT1A8Q9HAW9 530 aa11.23□□□□□ -0.61
SCFD1-206ENST00000484733 ASH1LQ9NR48 2969 aaKnown RBP11.22□□□□□ -0.61
SCFD1-206ENST00000484733 APOC4-APOC2K7ER74 178 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
SCFD1-206ENST00000484733 RASSF9O75901 435 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 ANXA9O76027 345 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 APOC2P02655 101 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 PRKAR1AP10644 381 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 F8A1P23610 371 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 CA5AP35218 305 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 DLSTP36957 453 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 DEFB109BQ30KR1 87 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 SARM1Q6SZW1 724 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 FAM151BQ6UXP7 276 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 FAM83HQ6ZRV2 1179 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-206ENST00000484733 PPP1R3BQ86XI6 285 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 RASGRP3Q8IV61 690 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 TC2NQ8N9U0 490 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 GALNT6Q8NCL4 622 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 IPMKQ8NFU5 416 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 ZNF398Q8TD17 642 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 BLOC1S5Q8TDH9 187 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 LINC00615Q96LM1 132 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-206ENST00000484733 GBA3Q9H227 469 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 RSPH14Q9UHP6 348 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 KCND3Q9UK17 655 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 CROTQ9UKG9 612 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 ACSL5Q9ULC5 683 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
SCFD1-206ENST00000484733 STX7O15400 261 aaKnown RBP11.21□□□□□ -0.61
SCFD1-206ENST00000484733 KIAA0754O94854 1291 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 ADRA1AP35348 466 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 CASRP41180 1078 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 TLE1Q04724 770 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 SEPT6Q14141 434 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 TAF1AQ15573 450 aaPredicted RBP11.21□□□□□ -0.61
SCFD1-206ENST00000484733 LONRF2Q1L5Z9 754 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 BCL7AQ4VC05 210 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 ITPRIPL1Q6GPH6 555 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 IRGCQ6NXR0 463 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 RANBP10Q6VN20 620 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 CARFQ8N187 725 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 SIDT2Q8NBJ9 832 aaKnown RBP11.21□□□□□ -0.61
SCFD1-206ENST00000484733 GPR150Q8NGU9 434 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 PDE7BQ9NP56 450 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 TRIM10Q9UDY6 481 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 PCDHA13Q9Y5I0 950 aa11.21□□□□□ -0.61
SCFD1-206ENST00000484733 MGAT4DA6NG13 374 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 AGAP14A8MT82 685 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 ZNF189O75820 626 aaPredicted RBP11.21□□□□□ -0.62
SCFD1-206ENST00000484733 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 MTHFD1P11586 935 aaKnown RBP11.21□□□□□ -0.62
SCFD1-206ENST00000484733 MSH3P20585 1137 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 LPOP22079 712 aaPredicted RBP11.21□□□□□ -0.62
SCFD1-206ENST00000484733 PTPN7P35236 360 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 ACY1Q03154 408 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 C16orf46Q6P387 395 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 FAM92BQ6ZTR7 304 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 PTRH1Q86Y79 214 aaKnown RBP11.21□□□□□ -0.62
SCFD1-206ENST00000484733 BEND7Q8N7W2 519 aaPredicted RBP11.21□□□□□ -0.62
SCFD1-206ENST00000484733 OR2L2Q8NH16 312 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 GORASP1Q9BQQ3 440 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.62
SCFD1-206ENST00000484733 PADI1Q9ULC6 663 aa11.21□□□□□ -0.62
SCFD1-206ENST00000484733 MRPS18BQ9Y676 258 aaKnown RBP11.21□□□□□ -0.62
SCFD1-206ENST00000484733 KCNMB2Q9Y691 235 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms