RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ZNF805Q5CZA5 627 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 C9orf64Q5T6V5 341 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 GPR153Q6NV75 609 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 GPSM1Q86YR5 675 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 PELI3Q8N2H9 469 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 HMGCLL1Q8TB92 370 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 PDLIM5Q96HC4 596 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 TACO1Q9BSH4 297 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 THTPAQ9BU02 230 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 TRMOQ9BU70 441 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 DEC1Q9P2X7 70 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 NKX1-2Q9UD57 310 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 GNPTGQ9UJJ9 305 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 TIMM22Q9Y584 194 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 COPG1Q9Y678 874 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 COMMD10Q9Y6G5 202 aa8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 ZNF106Q9H2Y7 1883 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-204ENST00000483763 NUP210Q8TEM1 1887 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 IGLV3-16A0A075B6K0 115 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 TSPAN11A1L157 253 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 C16orf96A6NNT2 1141 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 H3BQ06 376 aaPredicted RBP8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 SPINT1O43278 529 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 GUCA1CO95843 209 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 COX4I1P13073 169 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 PIK3R1P27986 724 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 CCR7P32248 378 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 PGM1P36871 562 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 NSG1P42857 185 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 ERFP50548 548 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 COPAP53621 1224 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 CREB5Q02930 508 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 ZRSR2Q15696 482 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 SERPINA13PQ6UXR4 307 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 ACAD11Q709F0 780 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 LARP4Q71RC2 724 aaKnown RBP eCLIP8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 PARS2Q7L3T8 475 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 CPSF7Q8N684 471 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 EFCAB3Q8N7B9 438 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 OR52B6Q8NGF0 335 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 CDK15Q96Q40 435 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 ACOX2Q99424 681 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 COPS8Q99627 209 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 SPATA16Q9BXB7 569 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 C1orf21Q9H246 121 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 GDE1Q9NZC3 331 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 SUN2Q9UH99 717 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 EIF2B4Q9UI10 523 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 PCTPQ9UKL6 214 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 F5P12259 2224 aa8.71□□□□□ -1.01
CDC42SE1-204ENST00000483763 PLXNB3Q9ULL4 1909 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 A0A088AWK7 358 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 TRPC5OSA6NMA1 111 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 SYCE1LA8MT33 242 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 FADS2P1A8MWK0 482 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 UPK3BL1B0FP48 263 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 UPK3BL2E5RIL1 263 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 KPNA3O00505 521 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 SGTAO43765 313 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 SNUPNO95149 360 aaKnown RBP8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 NFATC1O95644 943 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 SRPRAP08240 638 aaKnown RBP8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 FGF4P08620 206 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 PPARGP37231 505 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 OPRD1P41143 372 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 GDF5P43026 501 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 INHBCP55103 352 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 LCP2Q13094 533 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 ARHGEF7Q14155 803 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 KPNB1Q14974 876 aaKnown RBP8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 ANKRD54Q6NXT1 300 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 CHSY3Q70JA7 882 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 SYVN1Q86TM6 617 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 VRK3Q8IV63 474 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 CLYBLQ8N0X4 340 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 BEND7Q8N7W2 519 aaPredicted RBP8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 CEP70Q8NHQ1 597 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 FGF14Q92915 247 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 MCUR1Q96AQ8 359 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 C19orf60Q96EN9 201 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 MYADMQ96S97 322 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 CCDC28BQ9BUN5 200 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 C1QTNF3Q9BXJ4 246 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 TRPV4Q9HBA0 871 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 ZDHHC3Q9NYG2 299 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 CD274Q9NZQ7 290 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 SLC7A8Q9UHI5 535 aa8.71□□□□□ -1.02
CDC42SE1-204ENST00000483763 KRT87PA6NCN2 255 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 STX16-NPEPL1H3BU86 382 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 STX16O14662 325 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 PIP5K1BO14986 540 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 FFAR2O15552 330 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 PEX11AO75192 247 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ALDOCP09972 364 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 ITGAXP20702 1163 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 VIPR1P32241 457 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 MMP12P39900 470 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 PTPN5P54829 565 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 MXRA7P84157 204 aa8.7□□□□□ -1.02
CDC42SE1-204ENST00000483763 FCHO2Q0JRZ9 810 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms