RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 NKAIN2Q5VXU1 208 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 B3GNT8Q7Z7M8 397 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 SLC9B2Q86UD5 537 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 TRIM48Q8IWZ4 208 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 CLDN19Q8N6F1 224 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 NAT8LQ8N9F0 302 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 MCUQ8NE86 351 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 OR2L2Q8NH16 312 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 OR4L1Q8NH43 312 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 MFSD3Q96ES6 412 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 ATXN7L3BQ96GX2 97 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 RUNDC3BQ96NL0 473 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 SERPINB12Q96P63 405 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 TRIM51Q9BSJ1 452 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 KIFC1Q9BW19 673 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 RDH14Q9HBH5 336 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 MRM3Q9HC36 420 aaKnown RBP13.15□□□□□ -0.3
SSR1-208ENST00000483409 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
SSR1-208ENST00000483409 TREX1Q9NSU2 369 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 CATSPERZQ9NTU4 200 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 KCNK4Q9NYG8 393 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 ZNF624Q9P2J8 865 aaPredicted RBP13.15□□□□□ -0.3
SSR1-208ENST00000483409 CPNE7Q9UBL6 633 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 RNF14Q9UBS8 474 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 SOX13Q9UN79 622 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 PSMD13Q9UNM6 376 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 WDR37Q9Y2I8 494 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 ENTPD2Q9Y5L3 495 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 PRSS21Q9Y6M0 314 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 IGF2RP11717 2491 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 IGHV1OR21-1A0A087WYE8 117 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 MGAT4DA6NG13 374 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 CCDC188H7C350 402 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 DNALI1O14645 258 aaPredicted RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 TTI1O43156 1089 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 OR1I1O60431 355 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 VIPP01282 170 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 MLNP12872 115 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 SLC19A1P41440 591 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 HALP42357 657 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 NSG1P42857 185 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 MAPK9P45984 424 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 DR1Q01658 176 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 SEMA3AQ14563 771 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 ITIH4Q14624 930 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 CLCA4Q14CN2 919 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 FASTKD1Q53R41 847 aaKnown RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 AGAP9Q5VTM2 703 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 ABRAXAS1Q6UWZ7 409 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 WASH2PQ6VEQ5 465 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 LILRA3Q8N6C8 439 aaPredicted RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 OTUD6BQ8N6M0 293 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 NXPE2Q96DL1 559 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 LINC00615Q96LM1 132 aaPredicted RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 KRT12Q99456 494 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 NUDT22Q9BRQ3 303 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 TRIM56Q9BRZ2 755 aaKnown RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 ZMYND15Q9H091 742 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 WASH6PQ9NQA3 447 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 SAMD15Q9P1V8 674 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 MARCH4Q9P2E8 410 aaPredicted RBP13.14□□□□□ -0.31
SSR1-208ENST00000483409 FREM2Q5SZK8 3169 aa13.14□□□□□ -0.31
SSR1-208ENST00000483409 GOLGA8KD6RF30 607 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 GOLGA8TH3BQL2 631 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 AGRPO00253 132 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 CD3EAPO15446 510 aaKnown RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 ZW10O43264 779 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 MPOP05164 745 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 POLBP06746 335 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 PROS1P07225 676 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 XRCC1P18887 633 aaPredicted RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 ARNTP27540 789 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 CD1CP29017 333 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 CSF2RBP32927 897 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 MAGEA3P43357 314 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 MRPS25P82663 173 aaKnown RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 CYP4F3Q08477 520 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 C3orf38Q5JPI3 329 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 LYPLAL1Q5VWZ2 237 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 METRNLQ641Q3 311 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 XKR5Q6UX68 686 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 PACS1Q6VY07 963 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 CFAP206Q8IYR0 622 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 AGGF1Q8N302 714 aaeCLIP13.13□□□□□ -0.314e-23■□□□□ 10.7
SSR1-208ENST00000483409 AVL9Q8NBF6 648 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 GPR150Q8NGU9 434 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 HM13Q8TCT9 377 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 ZCCHC14Q8WYQ9 949 aaKnown RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 SH3KBP1Q96B97 665 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 CXorf40BQ96DE9 158 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms