RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-239ENST00000483086 OR10G6Q8NH81 332 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 BRSK1Q8TDC3 778 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 C1orf54Q8WWF1 131 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 TMEM159Q96B96 161 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 RTP4Q96DX8 246 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 DNAJC1Q96KC8 554 aaKnown RBP11.85□□□□□ -0.51
HDLBP-239ENST00000483086 UBL7Q96S82 380 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-239ENST00000483086 ASB8Q9H765 288 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 SLC40A1Q9NP59 571 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 WASH6PQ9NQA3 447 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 SIDT1Q9NXL6 827 aaKnown RBP11.85□□□□□ -0.51
HDLBP-239ENST00000483086 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.85□□□□□ -0.513e-6■■■□□ 17
HDLBP-239ENST00000483086 AAR2Q9Y312 384 aaKnown RBP11.85□□□□□ -0.51
HDLBP-239ENST00000483086 PKP3Q9Y446 797 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 PCDHGA3Q9Y5H0 932 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 CFAP20Q9Y6A4 193 aaKnown RBP11.85□□□□□ -0.51
HDLBP-239ENST00000483086 FER1L5A0AVI2 2057 aa11.85□□□□□ -0.51
HDLBP-239ENST00000483086 CCDC78A2IDD5 438 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 OR5K4A6NMS3 321 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-239ENST00000483086 LIASO43766 372 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 EPHA4P54764 986 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 SH3BP2P78314 561 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 CYP4F2P78329 520 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 RPE65Q16518 533 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 PARP6Q2NL67 630 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 LDLRAP1Q5SW96 308 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 FNBP1LQ5T0N5 605 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 MEI1Q5TIA1 1274 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 TIPARPQ7Z3E1 657 aaKnown RBP11.84□□□□□ -0.51
HDLBP-239ENST00000483086 SLC13A5Q86YT5 568 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-239ENST00000483086 PIANPQ8IYJ0 282 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 SYCE1Q8N0S2 351 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 RNF10Q8N5U6 811 aaKnown RBP11.84□□□□□ -0.51
HDLBP-239ENST00000483086 UBL4BQ8N7F7 174 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 AGBL5Q8NDL9 886 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 AHCYL2Q96HN2 611 aaKnown RBP11.84□□□□□ -0.51
HDLBP-239ENST00000483086 TAAR9Q96RI9 348 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 CCNL2Q96S94 520 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-239ENST00000483086 INSM2Q96T92 566 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-239ENST00000483086 UCK1Q9HA47 277 aa11.84□□□□□ -0.51
HDLBP-239ENST00000483086 TRBV5-4A0A0C4DH59 114 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 OR51F1A6NGY5 319 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 C2orf81A6NN90 581 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 PPFIA2O75334 1257 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 UBXN7O94888 489 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 VIPP01282 170 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 ZSCAN5DPP0CG00 497 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 IDSP22304 550 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 MC2RQ01718 297 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 ITGA9Q13797 1035 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 LY6DQ14210 128 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 POU6F1Q14863 301 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 LINC00303Q3SY05 128 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 CCDC38Q502W7 563 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 BROXQ5VW32 411 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 ZDHHC20Q5W0Z9 365 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 METRNLQ641Q3 311 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 CERS6Q6ZMG9 384 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 CCDC81Q6ZN84 652 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 ARHGEF18Q6ZSZ5 1173 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 AMZ2Q86W34 360 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 FAM129CQ86XR2 697 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 OR52K1Q8NGK4 314 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 NKD1Q969G9 470 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 C9orf72Q96LT7 481 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 RMDN2Q96LZ7 410 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 ZNF778Q96MU6 729 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 ETNK1Q9HBU6 452 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 POT1Q9NUX5 634 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 SLC39A1Q9NY26 324 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 FAM8A1Q9UBU6 413 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 PRSS21Q9Y6M0 314 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 RELNP78509 3460 aa11.83□□□□□ -0.52
HDLBP-239ENST00000483086 IGLV3-16A0A075B6K0 115 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 MROH6A6NGR9 719 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 B4E171 279 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 CAPN5O15484 640 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-239ENST00000483086 AP2A1O95782 977 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 SLC2A4P14672 509 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 ZNF28P17035 718 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 MSH3P20585 1137 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 PSMA3P25788 255 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 AKT1P31749 480 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 MC4RP32245 332 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 CSTF2P33240 577 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDLBP-239ENST00000483086 TSPAN7P41732 249 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 UCNP55089 124 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 SNX1Q13596 522 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 GTF2H3Q13889 308 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 PRPSAP1Q14558 356 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 BCL7AQ4VC05 210 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 LRRC8AQ8IWT6 810 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 NXPE1Q8N323 547 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 EXD3Q8N9H8 876 aa11.82□□□□□ -0.52
HDLBP-239ENST00000483086 SH3KBP1Q96B97 665 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms