RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PDPK2PQ6A1A2 396 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 KLHL35Q6PF15 583 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 RBM43Q6ZSC3 357 aaKnown RBP7.23□□□□□ -1.25
CSDE1-206ENST00000483030 MAMDC2Q7Z304 686 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-206ENST00000483030 C11orf96Q7Z7L8 435 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 TRAPPC5Q8IUR0 188 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 TTC30BQ8N4P2 665 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 PQLC3Q8N755 202 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 CNTD1Q8N815 330 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 NIPA2Q8N8Q9 360 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 GPATCH11Q8N954 259 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 Q8NA96 180 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 SLC38A9Q8NBW4 561 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 FDCSPQ8NFU4 85 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 GDAP1Q8TB36 358 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 C19orf60Q96EN9 201 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF514Q96K75 400 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-206ENST00000483030 GPR63Q9BZJ6 419 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 THAP2Q9H0W7 228 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 CHST8Q9H2A9 424 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 MAGEE1Q9HCI5 957 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 BPIFA1Q9NP55 256 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 RAD18Q9NS91 495 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 KCND1Q9NSA2 647 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 LMBRD1Q9NUN5 540 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 ANAPC7Q9UJX3 599 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 TMPRSS11EQ9UL52 423 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 BOLA1Q9Y3E2 137 aa7.23□□□□□ -1.25
CSDE1-206ENST00000483030 UBA6A0AVT1 1052 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 WIPF3A6NGB9 483 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 MEN1O00255 615 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 AURKAO14965 403 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CLGNO14967 610 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 DDX3YO15523 660 aaKnown RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 KRT86O43790 486 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 DPM1O60762 260 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CPNE3O75131 537 aaKnown RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 SCRG1O75711 98 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 POP7O75817 140 aaKnown RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CEACAM4O75871 244 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CLDN1O95832 211 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CYP1A2P05177 515 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 KLK3P07288 261 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 VCLP18206 1134 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 DCTP40126 519 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 TUBB4BP68371 445 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 HSD11B2P80365 405 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CDK18Q07002 472 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ZBTB17Q13105 803 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 GPS2Q13227 327 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 TUBB2AQ13885 445 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 GTF2H3Q13889 308 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 PLCL1Q15111 1095 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 PDK2Q15119 407 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 GPR19Q15760 415 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 PCSK7Q16549 785 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 STX1AQ16623 288 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ATP13A5Q4VNC0 1218 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 DNTTIP2Q5QJE6 756 aaKnown RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ZFYVE27Q5T4F4 411 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 FAM69BQ5VUD6 431 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 SLC6A19Q695T7 634 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 LCN10Q6JVE6 187 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 NT5DC3Q86UY8 548 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 AMZ2Q86W34 360 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 KMT5CQ86Y97 462 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CPNE8Q86YQ8 564 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 TMEM126BQ8IUX1 230 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 RHOT1Q8IXI2 618 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 D2HGDHQ8N465 521 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 RBMXL3Q8N7X1 1067 aaKnown RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ENDOVQ8N8Q3 282 aaKnown RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 GPR150Q8NGU9 434 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ADAMTS17Q8TE56 1095 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 HDAC11Q96DB2 347 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 TCTN2Q96GX1 697 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 TTC25Q96NG3 672 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 AGAP3Q96P47 875 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 TRIB3Q96RU7 358 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF670Q9BS34 389 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 TUBB2BQ9BVA1 445 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 NUDT9Q9BW91 350 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CEP41Q9BYV8 373 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 SLC29A3Q9BZD2 475 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 HRASLS2Q9NWW9 162 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 NFKBIL1Q9UBC1 381 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ERRFI1Q9UJM3 462 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 PSMD13Q9UNM6 376 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 ZNF711Q9Y462 761 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 PCDHGB7Q9Y5F8 929 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 CFAP20Q9Y6A4 193 aaKnown RBP7.22□□□□□ -1.25
CSDE1-206ENST00000483030 NBPF19A0A087WUL8 3843 aa7.22□□□□□ -1.25
CSDE1-206ENST00000483030 SSU72P8A0A1W2PR75 194 aa7.21□□□□□ -1.26
CSDE1-206ENST00000483030 OR5K3A6NET4 321 aa7.21□□□□□ -1.26
CSDE1-206ENST00000483030 TLCD2A6NGC4 264 aa7.21□□□□□ -1.26
CSDE1-206ENST00000483030 UGT1A9O60656 530 aa7.21□□□□□ -1.26
CSDE1-206ENST00000483030 KCNJ13O60928 360 aa7.21□□□□□ -1.26
CSDE1-206ENST00000483030 TMEM63AO94886 807 aa7.21□□□□□ -1.26
CSDE1-206ENST00000483030 ZBTB11O95625 1053 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-206ENST00000483030 LDLRP01130 860 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms