RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 RBM20Q5T481 1227 aaKnown RBP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 PACS1Q6VY07 963 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 TAF8Q7Z7C8 310 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 RELL1Q8IUW5 271 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 OXR1Q8N573 874 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 GPATCH11Q8N954 259 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 EIF1ADQ8N9N8 165 aaKnown RBP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 MYRIPQ8NFW9 859 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 TXLNGYQ9BZA5 131 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 ZDHHC5Q9C0B5 715 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 KLC4Q9NSK0 619 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 SIRPGQ9P1W8 387 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 SLC23A2Q9UGH3 650 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 RABGEF1Q9UJ41 708 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 GNPTGQ9UJJ9 305 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 RAB21Q9UL25 225 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-208ENST00000482310 FAM159BA6NKW6 160 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 SMIM23A6NLE4 172 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 B4DGG1 531 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 E5RI56 91 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 KMOO15229 486 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 AQP9O43315 295 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 POP7O75817 140 aaKnown RBP13.02□□□□□ -0.33
HDAC1-208ENST00000482310 PIAS2O75928 621 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 AHSGP02765 367 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 OR56A5P0C7T3 313 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 GABRB3P28472 473 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 EPHA8P29322 1005 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-208ENST00000482310 ACTR1BP42025 376 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 CD151P48509 253 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 PRLHRP49683 370 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 PGGT1BP53609 377 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 ACTR1AP61163 376 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 CTBSQ01459 385 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDAC1-208ENST00000482310 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 TRMT10CQ7L0Y3 403 aaKnown RBP13.02□□□□□ -0.33
HDAC1-208ENST00000482310 CNTN4Q8IWV2 1026 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 LMNTD2Q8IXW0 634 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 KIAA2013Q8IYS2 634 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 LILRA3Q8N6C8 439 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-208ENST00000482310 HEXDCQ8WVB3 486 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 ELMO1Q92556 727 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 ELMO2Q96JJ3 720 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 TCF12Q99081 682 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 P2RY12Q9H244 342 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 RMI1Q9H9A7 625 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 ERVMER34-1Q9H9K5 563 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 INTS10Q9NVR2 710 aaKnown RBP13.02□□□□□ -0.33
HDAC1-208ENST00000482310 SPASTQ9UBP0 616 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 ST14Q9Y5Y6 855 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 DGKBQ9Y6T7 804 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 CEP250Q9BV73 2442 aa13.02□□□□□ -0.33
HDAC1-208ENST00000482310 TRBV23OR9-2A0A075B6M9 112 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 EXOC1LA0A1B0GW35 172 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 CHUKO15111 745 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 PKMP14618 531 aaKnown RBP13.01□□□□□ -0.33
HDAC1-208ENST00000482310 CHRM3P20309 590 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 DGKAP23743 735 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 RPL10P27635 214 aaKnown RBP13.01□□□□□ -0.33
HDAC1-208ENST00000482310 HSD17B3P37058 310 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 PREPP48147 710 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 FRG1Q14331 258 aaKnown RBP13.01□□□□□ -0.33
HDAC1-208ENST00000482310 SLC29A2Q14542 456 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 ELOCQ15369 112 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 MAP9Q49MG5 647 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 BCL7AQ4VC05 210 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 SYTL3Q4VX76 610 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 ZNF549Q6P9A3 640 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 EMBQ6PCB8 327 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 FAM83HQ6ZRV2 1179 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-208ENST00000482310 PIM3Q86V86 326 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 AMZ2Q86W34 360 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 SFTPA2Q8IWL1 248 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC1-208ENST00000482310 SCARF2Q96GP6 870 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-208ENST00000482310 CYTH2Q99418 400 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 CCM2Q9BSQ5 444 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 EPB41L4BQ9H329 900 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 ACSS3Q9H6R3 686 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 TMEM9BQ9NQ34 198 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 PSMD13Q9UNM6 376 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 VPS9D1Q9Y2B5 631 aa13.01□□□□□ -0.33
HDAC1-208ENST00000482310 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13□□□□□ -0.33
HDAC1-208ENST00000482310 FAM95CA0A1B0GW59 222 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 C4orf47A7E2U8 309 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 PDZK1P1A8MUH7 402 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 GPR89AB7ZAQ6 455 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 LRP3O75074 770 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 AP2A2O94973 939 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 C1QAP02745 245 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 FTH1P02794 183 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 SHBGP04278 402 aa13□□□□□ -0.33
HDAC1-208ENST00000482310 ANXA6P08133 673 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms