RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PSMD10O75832 226 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 CTAGE8P0CG41 777 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 FAM106CPP0CH98 169 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 T-ENOLP0DO92 83 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 CCKBRP32239 447 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 USP8P40818 1118 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 KRTAP10-11P60412 298 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 TROAPQ12815 778 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 AIMP1Q12904 312 aaKnown RBP5.5□□□□□ -1.53
SF3B1-210ENST00000482158 GAGE2BQ13066 116 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 GTF2H2Q13888 395 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 MELKQ14680 651 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 TMEM266Q2M3C6 531 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 GAGE2EQ4V326 116 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF585BQ52M93 769 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 ALS2CLQ60I27 953 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF324BQ6AW86 544 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-210ENST00000482158 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 GTF2H2CQ6P1K8 395 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 KMT5CQ86Y97 462 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 CTAGE4Q8IX94 777 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.5□□□□□ -1.53
SF3B1-210ENST00000482158 C1orf52Q8N6N3 182 aaKnown RBP5.5□□□□□ -1.53
SF3B1-210ENST00000482158 POGLUT1Q8NBL1 392 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 RBM15BQ8NDT2 890 aaKnown RBP5.5□□□□□ -1.53
SF3B1-210ENST00000482158 WDR20Q8TBZ3 569 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 SORCS1Q8WY21 1168 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 ERLEC1Q96DZ1 483 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 CDCA5Q96FF9 252 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 THOC3Q96J01 351 aaKnown RBP5.5□□□□□ -1.53
SF3B1-210ENST00000482158 LRMDAQ9H2I8 198 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 SLC35C2Q9NQQ7 365 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 TCP11L1Q9NUJ3 509 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 C5AR2Q9P296 337 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 GAGE2DQ9UEU5 116 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 IGHV4OR15-8A0A075B7B6 117 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 HEPACAM2A8MVW5 462 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 TO15178 435 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 ZNHIT1O43257 154 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 WDR1O75083 606 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 TOMM70O94826 608 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 GCNT3O95395 438 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 CDH1P12830 882 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 GM2AP17900 193 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 POLR2CP19387 275 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-210ENST00000482158 LMAN1P49257 510 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 FUT6P51993 359 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 CALD1Q05682 793 aaKnown RBP5.49□□□□□ -1.53
SF3B1-210ENST00000482158 ILF3Q12906 894 aaKnown RBP eCLIP5.49□□□□□ -1.53
SF3B1-210ENST00000482158 KRT33BQ14525 404 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 IL11RAQ14626 422 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 SLC39A14Q15043 492 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 KYNUQ16719 465 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 TMEM35AQ53FP2 167 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 LRCH2Q5VUJ6 765 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF704Q6ZNC4 412 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-210ENST00000482158 POMGNT2Q8NAT1 580 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 PGAP3Q96FM1 320 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-210ENST00000482158 C16orf70Q9BSU1 422 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 CCDC106Q9BWC9 280 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 C1QTNF4Q9BXJ3 329 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 SLA2Q9H6Q3 261 aa5.49□□□□□ -1.53
SF3B1-210ENST00000482158 CHMP1AQ9HD42 196 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-210ENST00000482158 PPIEQ9UNP9 301 aaKnown RBP5.49□□□□□ -1.53
SF3B1-210ENST00000482158 SAA2-SAA4A0A096LPE2 208 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 FEZF1A0PJY2 475 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 CLGNO14967 610 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 EIF3DO15371 548 aaKnown RBP eCLIP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 ABCB1P08183 1280 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 CCKARP32238 428 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 GNL1P36915 607 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 ARCN1P48444 511 aaKnown RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 CDH13P55290 713 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 UBXN2AP68543 259 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 SNTB1Q13884 538 aaKnown RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 STXBP5Q5T5C0 1151 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 TMEM211Q6ICI0 200 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 OR7E24Q6IFN5 339 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 MEPCEQ7L2J0 689 aaKnown RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 SFR1Q86XK3 245 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 FBXO39Q8N4B4 442 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 TDRD5Q8NAT2 981 aaKnown RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 MCUQ8NE86 351 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 OR10S1Q8NGN2 331 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 TMEM255BQ8WV15 326 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 PHF21AQ96BD5 680 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 PTERQ96BW5 349 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF582Q96NG8 517 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 MEIS3Q99687 375 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 OLFM1Q99784 485 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 GPR88Q9GZN0 384 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 GOLPH3LQ9H4A5 285 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 C6orf106Q9H6K1 298 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-210ENST00000482158 TAB2Q9NYJ8 693 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 WDR35Q9P2L0 1181 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF711Q9Y462 761 aa5.48□□□□□ -1.53
SF3B1-210ENST00000482158 DOCK7Q96N67 2140 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 PRAC2D3DTV9 90 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 SLC16A5O15375 505 aa5.47□□□□□ -1.53
SF3B1-210ENST00000482158 TBX10O75333 385 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms