RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ECHDC3Q96DC8 303 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 MED8Q96G25 268 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 MCEEQ96PE7 176 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 WRAP53Q9BUR4 548 aaKnown RBP6.46□□□□□ -1.38
LRCH3-216ENST00000481048 KLC2Q9H0B6 622 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 LRRN3Q9H3W5 708 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 PDFQ9HBH1 243 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 CPNE5Q9HCH3 593 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 PARVAQ9NVD7 372 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 ANO10Q9NW15 660 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 FANCLQ9NW38 375 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 SEPT10Q9P0V9 454 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 TSC22D4Q9Y3Q8 395 aa6.46□□□□□ -1.38
LRCH3-216ENST00000481048 CFAP46Q8IYW2 2715 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 NPEPPSL1A6NEC2 478 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 D6RAR5 112 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 J3KR12 359 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 EEF2KO00418 725 aaKnown RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 TRAFD1O14545 582 aaPredicted RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 INSIG1O15503 277 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 DAPK3O43293 454 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 PIGNO95427 931 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 GJB6O95452 261 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 ZNF28P17035 718 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 TNFAIP3P21580 790 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 TEAD1P28347 426 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 SLC5A2P31639 672 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 UGT1A5P35504 534 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 HSPA9P38646 679 aaKnown RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 PDX1P52945 283 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 AP1S1P61966 158 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 CCL7P80098 99 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 MYL5Q02045 173 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 ZFP36L1Q07352 338 aaKnown RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 MAMLD1Q13495 774 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 ICAM4Q14773 271 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 PLEKHA7Q6IQ23 1121 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 SASS6Q6UVJ0 657 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 RD3Q7Z3Z2 195 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 IRF2BP2Q7Z5L9 587 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 TAF8Q7Z7C8 310 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 CAMK1DQ8IU85 385 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 LRRC49Q8IUZ0 686 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 PCDH19Q8TAB3 1148 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 ZNF599Q96NL3 588 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 PSKH2Q96QS6 385 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 CMKLR1Q99788 373 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 DPYSL5Q9BPU6 564 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 CINPQ9BW66 212 aaPredicted RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 LGR4Q9BXB1 951 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 SLC39A8Q9C0K1 460 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 CAAP1Q9H8G2 361 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 L2HGDHQ9H9P8 463 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 LMBRD1Q9NUN5 540 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 SEPT11Q9NVA2 429 aaKnown RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 AKAP7Q9P0M2 348 aaPredicted RBP6.45□□□□□ -1.38
LRCH3-216ENST00000481048 COQ6Q9Y2Z9 468 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 OR1A2Q9Y585 309 aa6.45□□□□□ -1.38
LRCH3-216ENST00000481048 A0A1W2PQM1 296 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 FAM170AA1A519 330 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 TMEM191CA6NGB0 347 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PSMD11O00231 422 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 HGSO14964 777 aaPredicted RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 HTRA2O43464 458 aaPredicted RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PRPSAP2O60256 369 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SOCS5O75159 536 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 RECQL5O94762 991 aaPredicted RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PCCBP05166 539 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 RPLP0P05388 317 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 ELFN1P0C7U0 828 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 JMJD7P0C870 316 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 LIPCP11150 499 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 NAT2P11245 290 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 ERCC2P18074 760 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PSMA2P25787 234 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 BCL6P41182 706 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 GPR3P46089 330 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PAPOLAP51003 745 aaKnown RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SCNN1BP51168 640 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 HMGA2P52926 109 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 SQSTM1Q13501 440 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 TRA2AQ13595 282 aaKnown RBP eCLIP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 ARHGEF7Q14155 803 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 HLTFQ14527 1009 aaKnown RBP eCLIP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 NR1D2Q14995 579 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 CDSNQ15517 529 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 ZSCAN23Q3MJ62 389 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 C14orf28Q4W4Y0 310 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 BOLA3Q53S33 107 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 LRRC73Q5JTD7 316 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 CERCAMQ5T4B2 595 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PNCKQ6P2M8 343 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 CRTC1Q6UUV9 634 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 RFX8Q6ZV50 586 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 USP53Q70EK8 1073 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 DPPA4Q7L190 304 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 PIM3Q86V86 326 aa6.44□□□□□ -1.38
LRCH3-216ENST00000481048 C17orf82Q86X59 251 aaPredicted RBP6.44□□□□□ -1.38
LRCH3-216ENST00000481048 ARHGAP12Q8IWW6 846 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms