RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CACHD1Q5VU97 1274 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 TMEM220Q6QAJ8 160 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 AMZ2Q86W34 360 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 RASGRP3Q8IV61 690 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 RBM12BQ8IXT5 1001 aaKnown RBP14.96□□□□□ -0.01
LIMS3-203ENST00000480744 ESX1Q8N693 406 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 RASGEF1AQ8N9B8 481 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 STARD8Q92502 1023 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 KRT35Q92764 455 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 ZDHHC12Q96GR4 267 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 FICDQ9BVA6 458 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 TRIM5Q9C035 493 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 ZNF768Q9H5H4 540 aaKnown RBP14.96□□□□□ -0.01
LIMS3-203ENST00000480744 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 RPS6KL1Q9Y6S9 549 aa14.96□□□□□ -0.01
LIMS3-203ENST00000480744 HACD1B0YJ81 288 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 STX7O15400 261 aaKnown RBP14.95□□□□□ -0.02
LIMS3-203ENST00000480744 TOX3O15405 576 aaPredicted RBP14.95□□□□□ -0.02
LIMS3-203ENST00000480744 SUV39H1O43463 412 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 TCN2P20062 427 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 RBL1P28749 1068 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 OAS2P29728 719 aaKnown RBP14.95□□□□□ -0.02
LIMS3-203ENST00000480744 CA5AP35218 305 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 STAT5AP42229 794 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 MC1RQ01726 317 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 ITGA9Q13797 1035 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 PTPRCAPQ14761 206 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 SPA17Q15506 151 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 DEFB109BQ30KR1 87 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 GPRC6AQ5T6X5 926 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 ATP1A1-AS1Q5TC04 95 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 C11orf63Q6NUN7 778 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 C6orf15Q6UXA7 325 aaPredicted RBP14.95□□□□□ -0.02
LIMS3-203ENST00000480744 FAM83HQ6ZRV2 1179 aaPredicted RBP14.95□□□□□ -0.02
LIMS3-203ENST00000480744 DET1Q7L5Y6 550 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 DAAM2Q86T65 1068 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 TC2NQ8N9U0 490 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 GALNT6Q8NCL4 622 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 DDHD1Q8NEL9 900 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 GPR150Q8NGU9 434 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 STAMBPL1Q96FJ0 436 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.95□□□□□ -0.02
LIMS3-203ENST00000480744 FAM8A1Q9UBU6 413 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 LNPEPQ9UIQ6 1025 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 TRHDEQ9UKU6 1024 aa14.95□□□□□ -0.02
LIMS3-203ENST00000480744 MRPS18BQ9Y676 258 aaKnown RBP14.95□□□□□ -0.02
LIMS3-203ENST00000480744 TERTO14746 1132 aaKnown RBP14.94□□□□□ -0.02
LIMS3-203ENST00000480744 KCNJ13O60928 360 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 KIAA0754O94854 1291 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 NDUFA10O95299 355 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 AGTP01019 485 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 MSH3P20585 1137 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 DLSTP36957 453 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 CSRP3P50461 194 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 GEMP55040 296 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 PPP1CAP62136 330 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 MAP7Q14244 749 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 NFE2L1Q14494 772 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 PLCL1Q15111 1095 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 FNBP1LQ5T0N5 605 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 ITPRIPL1Q6GPH6 555 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 BBS12Q6ZW61 710 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 PRSS42Q7Z5A4 293 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 BEND7Q8N7W2 519 aaPredicted RBP14.94□□□□□ -0.02
LIMS3-203ENST00000480744 APOL2Q9BQE5 337 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 GBA3Q9H227 469 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 LUC7LQ9NQ29 371 aaKnown RBP14.94□□□□□ -0.02
LIMS3-203ENST00000480744 IMP3Q9NV31 184 aaKnown RBP14.94□□□□□ -0.02
LIMS3-203ENST00000480744 ARL5AQ9Y689 179 aa14.94□□□□□ -0.02
LIMS3-203ENST00000480744 BSNQ9UPA5 3926 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 APOC4-APOC2K7ER74 178 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 GAPDHSO14556 408 aaPredicted RBP14.93□□□□□ -0.02
LIMS3-203ENST00000480744 KATNA1O75449 491 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 ANXA9O76027 345 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 LCA5LO95447 670 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 PRAMEF1O95521 474 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 APOC2P02655 101 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 FECHP22830 423 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 CTNNA2P26232 953 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 CYLC1P35663 651 aaPredicted RBP14.93□□□□□ -0.02
LIMS3-203ENST00000480744 DMPKQ09013 629 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 XRCC4Q13426 336 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 IL11RAQ14626 422 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 RPE65Q16518 533 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 LONRF2Q1L5Z9 754 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 C9orf43Q8TAL5 461 aaPredicted RBP14.93□□□□□ -0.02
LIMS3-203ENST00000480744 ZNF398Q8TD17 642 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 DTX3LQ8TDB6 740 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 NAT14Q8WUY8 206 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 FERMT1Q9BQL6 677 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 ZNF71Q9NQZ8 489 aaPredicted RBP14.93□□□□□ -0.02
LIMS3-203ENST00000480744 TUBD1Q9UJT1 453 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 CROTQ9UKG9 612 aa14.93□□□□□ -0.02
LIMS3-203ENST00000480744 CFAP20Q9Y6A4 193 aaKnown RBP14.93□□□□□ -0.02
LIMS3-203ENST00000480744 C2orf81A6NN90 581 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 SPAG6O75602 509 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 STK10O94804 968 aaKnown RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 NELFEP18615 380 aaKnown RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 LPOP22079 712 aaPredicted RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 F8A1P23610 371 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms