RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 UGT1A3P35503 534 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 ETV5P41161 510 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 ABHD18Q0P651 414 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 PLCL1Q15111 1095 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 CHRNA6Q15825 494 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 SEPT7Q16181 437 aaKnown RBP11.24□□□□□ -0.61
CCM2-213ENST00000480658 PLA2G4EQ3MJ16 856 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 GPRC6AQ5T6X5 926 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 SNX20Q7Z614 316 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 ZNF605Q86T29 641 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 ZNF547Q8IVP9 402 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 CACNA2D3Q8IZS8 1091 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 OR2L2Q8NH16 312 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCM2-213ENST00000480658 FCRL4Q96PJ5 515 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 COPS8Q99627 209 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 FICDQ9BVA6 458 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 RBSNQ9H1K0 784 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 ADNPQ9H2P0 1102 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 ASB8Q9H765 288 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 PDE7BQ9NP56 450 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 TMEM184BQ9Y519 407 aaPredicted RBP11.24□□□□□ -0.61
CCM2-213ENST00000480658 B3GALT1Q9Y5Z6 326 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 LOC400499M0QZD8 3231 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 SCN8AQ9UQD0 1980 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 TRBV23OR9-2A0A075B6M9 112 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 MGAT4DA6NG13 374 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 AGAP14A8MT82 685 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 H7C0S8 307 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 CASC3O15234 703 aaKnown RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 RAD1O60671 282 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 MTX2O75431 263 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 POP7O75817 140 aaKnown RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 EML2O95834 649 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 RPL10P27635 214 aaKnown RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 PSMB4P28070 264 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 ADRA1AP35348 466 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 PPARGP37231 505 aaPredicted RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 CHRNA4P43681 627 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 PLOD1Q02809 727 aaPredicted RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 PRKAA1Q13131 559 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 RPA4Q13156 261 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 GPR18Q14330 331 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 LLGL1Q15334 1064 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 SNAP47Q5SQN1 464 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 METRNLQ641Q3 311 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 ARMC6Q6NXE6 501 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 C4orf22Q6V702 233 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 RAD9BQ6WBX8 426 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 C11orf96Q7Z7L8 435 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 OOSP2Q86WS3 158 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 ZFAND4Q86XD8 727 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 ZNF761Q86XN6 746 aaPredicted RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 KLHDC8BQ8IXV7 354 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 OR4K2Q8NGD2 314 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 OR8K5Q8NH50 307 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 HM13Q8TCT9 377 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 NKD1Q969G9 470 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 RTP4Q96DX8 246 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 GPN2Q9H9Y4 310 aaPredicted RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 FANCEQ9HB96 536 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 TUBD1Q9UJT1 453 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 KCND3Q9UK17 655 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 PCYT1BQ9Y5K3 369 aaPredicted RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 ARL5AQ9Y689 179 aa11.23□□□□□ -0.61
CCM2-213ENST00000480658 ZNF106Q9H2Y7 1883 aaKnown RBP11.23□□□□□ -0.61
CCM2-213ENST00000480658 SMG1Q96Q15 3661 aaKnown RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 OR2AG2A6NM03 316 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 IFRD1O00458 451 aaPredicted RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 ARHGAP6O43182 974 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ZFC3H1O60293 1989 aaKnown RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 AP2A2O94973 939 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 AGTP01019 485 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 CCNYL3P0C7X3 344 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 MTHFD1P11586 935 aaKnown RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 MPSTP25325 297 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 FDFT1P37268 417 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 SLC19A1P41440 591 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 PRLHRP49683 370 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ARL4DP49703 201 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 DRG2P55039 364 aaKnown RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 ACY1Q03154 408 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
CCM2-213ENST00000480658 KRT33BQ14525 404 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 SKIDA1Q1XH10 827 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCM2-213ENST00000480658 FNBP1LQ5T0N5 605 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ANKS6Q68DC2 871 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 BORAQ6PGQ7 559 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 TMEM220Q6QAJ8 160 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 B4GALNT4Q76KP1 1039 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 NLRP9Q7RTR0 991 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 NXPE1Q8N323 547 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ZNF843Q8N446 348 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 RASGEF1AQ8N9B8 481 aa11.22□□□□□ -0.61
CCM2-213ENST00000480658 ACRBPQ8NEB7 543 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms