RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 AHCYL2Q96HN2 611 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 ANKRD27Q96NW4 1050 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 CATSPER2Q96P56 530 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TSGA13Q96PP4 275 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 FERMT1Q9BQL6 677 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TEX101Q9BY14 249 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 FRMD8Q9BZ67 464 aaPredicted RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 GPN2Q9H9Y4 310 aaPredicted RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 PCDH9Q9HC56 1237 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 LZTFL1Q9NQ48 299 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 RAD18Q9NS91 495 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TRNAU1APQ9NX07 287 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 PKD2L2Q9NZM6 624 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 CORO1CQ9ULV4 474 aaPredicted RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 RPL26L1Q9UNX3 145 aaKnown RBP6.58□□□□□ -1.36
VCP-205ENST00000479300 HEY1Q9Y5J3 304 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 KCNMB2Q9Y691 235 aa6.58□□□□□ -1.36
VCP-205ENST00000479300 TNRC6AQ8NDV7 1962 aaKnown RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 A0A0J9YYE9 177 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 C1orf232A0A0U1RR37 186 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 A1L4Q6 167 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 NPIPB15A6NHN6 443 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 MGRN1O60291 552 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 DLGAP3O95886 979 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 FAM107AO95990 144 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 PEX11BO96011 259 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 JCHAINP01591 159 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 TRBC1P01850 177 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CD48P09326 243 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 LSP1P33241 339 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CETN2P41208 172 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 SLC1A1P43005 524 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 GPR3P46089 330 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 POLD2P49005 469 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CDK3Q00526 305 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CTBSQ01459 385 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 MC2RQ01718 297 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 DSC2Q02487 901 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 DPTQ07507 201 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 KLRB1Q12918 225 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 TRA2AQ13595 282 aaKnown RBP eCLIP6.57□□□□□ -1.36
VCP-205ENST00000479300 TFDP2Q14188 446 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 SPA17Q15506 151 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CLPPQ16740 277 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 ATP13A4Q4VNC1 1196 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 LRRC66Q68CR7 880 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 SLC30A9Q6PML9 568 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 ADAMTSL4Q6UY14 1074 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 MARK2Q7KZI7 788 aaKnown RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 ZNF765Q7L2R6 523 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 ARHGAP22Q7Z5H3 698 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 HSD11B1LQ7Z5J1 315 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 FAM129CQ86XR2 697 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 RAVER1Q8IY67 606 aaKnown RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 NLGN4XQ8N0W4 816 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CBARPQ8N350 705 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 ARFGAP2Q8N6H7 521 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 NLGN4YQ8NFZ3 816 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 TRIM58Q8NG06 486 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 EXD1Q8NHP7 514 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 SLC35G2Q8TBE7 412 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 STARD8Q92502 1023 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 MAML1Q92585 1016 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 HDAC11Q96DB2 347 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 RNF157Q96PX1 679 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 OR2M4Q96R27 311 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 MCCC1Q96RQ3 725 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 SRPK1Q96SB4 655 aaKnown RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 DNAJC7Q99615 494 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 DPYSL5Q9BPU6 564 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 MLPHQ9BV36 600 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 BRD8Q9H0E9 1235 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 ABCG8Q9H221 673 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 NHEJ1Q9H9Q4 299 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 ABHD10Q9NUJ1 306 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 ZNHIT2Q9UHR6 403 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CD84Q9UIB8 345 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 CHKBQ9Y259 395 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.57□□□□□ -1.36
VCP-205ENST00000479300 PPIL1Q9Y3C6 166 aa6.57□□□□□ -1.36
VCP-205ENST00000479300 TMEM184BQ9Y519 407 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 PCYT1BQ9Y5K3 369 aaPredicted RBP6.57□□□□□ -1.36
VCP-205ENST00000479300 A0A0U1RQS6 177 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 RGSL1A5PLK6 1076 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 C5orf60A6NFR6 353 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 A8MU76 341 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 ZNF487B1APH4 448 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 BHMG1C9JSJ3 638 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 INPP4BO15327 924 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 CAPN5O15484 640 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 COQ9O75208 318 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SMNDC1O75940 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
VCP-205ENST00000479300 STK17BO94768 372 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 AGFG2O95081 481 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 MAP3K6O95382 1288 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 CLDN1O95832 211 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SOD1P00441 154 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 GSTA1P08263 222 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 PDHA1P08559 390 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 ZNF28P17035 718 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms