RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 CCNG2Q16589 344 aa18.41■□□□□ 0.54
SREBF1-212ENST00000478616 FNBP1LQ5T0N5 605 aa18.41■□□□□ 0.54
SREBF1-212ENST00000478616 DRICH1Q6PGQ1 229 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-212ENST00000478616 WDR74Q6RFH5 385 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-212ENST00000478616 UBE2Q2Q8WVN8 375 aa18.41■□□□□ 0.54
SREBF1-212ENST00000478616 CDKN2AIPNLQ96HQ2 116 aa18.41■□□□□ 0.54
SREBF1-212ENST00000478616 ZNF778Q96MU6 729 aa18.41■□□□□ 0.54
SREBF1-212ENST00000478616 PPP1R2P1Q96PQ5 205 aa18.41■□□□□ 0.54
SREBF1-212ENST00000478616 FRMD8P1Q9BZ68 369 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-212ENST00000478616 MN1Q10571 1320 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-212ENST00000478616 CCDC78A2IDD5 438 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 OR51F1A6NGY5 319 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 PDZK1P1A8MUH7 402 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 KLK10O43240 276 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 KCNJ1P48048 391 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 TRA2AQ13595 282 aaKnown RBP eCLIP18.4■□□□□ 0.54
SREBF1-212ENST00000478616 GPR18Q14330 331 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 RPE65Q16518 533 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 BCL7AQ4VC05 210 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 CCDC38Q502W7 563 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 METRNLQ641Q3 311 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 LRRC69Q6ZNQ3 347 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 SNX20Q7Z614 316 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 AMZ2Q86W34 360 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 ZFAND4Q86XD8 727 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 DTX1Q86Y01 620 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 PRELID2Q8N945 189 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 SPDYE1Q8NFV5 336 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-212ENST00000478616 OR13J1Q8NGT2 312 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 RSC1A1Q92681 617 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 TMEM159Q96B96 161 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 LINC00615Q96LM1 132 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-212ENST00000478616 CMKLR1Q99788 373 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 SPRY4Q9C004 299 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 CASS4Q9NQ75 786 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 SLC2A6Q9UGQ3 507 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 PSMD13Q9UNM6 376 aa18.4■□□□□ 0.54
SREBF1-212ENST00000478616 DNMT3AQ9Y6K1 912 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-212ENST00000478616 DUX1O43812 170 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 IFNB1P01574 187 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 FGGP02679 453 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 C9P02748 559 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 PTMAP06454 111 aaKnown RBP18.39■□□□□ 0.53
SREBF1-212ENST00000478616 JMJD7P0C870 316 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 WT1P19544 449 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-212ENST00000478616 IDSP22304 550 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 FOXN2P32314 431 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 MAPK10P53779 464 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 PPP1CAP62136 330 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 GTF2H3Q13889 308 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 DUS1LQ6P1R4 473 aaKnown RBP18.39■□□□□ 0.53
SREBF1-212ENST00000478616 ZNF534Q76KX8 674 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 OR10G6Q8NH81 332 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 JPH3Q8WXH2 748 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-212ENST00000478616 NCSTNQ92542 709 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 RMDN2Q96LZ7 410 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 INSM2Q96T92 566 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-212ENST00000478616 NRTNQ99748 197 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 DPH1Q9BZG8 443 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 ZNF148Q9UQR1 794 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 DRG1Q9Y295 367 aaKnown RBP18.39■□□□□ 0.53
SREBF1-212ENST00000478616 PRSS21Q9Y6M0 314 aa18.39■□□□□ 0.53
SREBF1-212ENST00000478616 CCDC162PA2VCL2 907 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 MGAT4DA6NG13 374 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 A8MU76 341 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 KCNJ13O60928 360 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 SLC2A4P14672 509 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 TYRP1P17643 537 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 MSH3P20585 1137 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 PBLDP30039 288 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-212ENST00000478616 AKT1P31749 480 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 LEPRP48357 1165 aaKnown RBP18.38■□□□□ 0.53
SREBF1-212ENST00000478616 PRLHRP49683 370 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 ACVR1Q04771 509 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 BIRC2Q13490 618 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 DBN1Q16643 649 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 SERPINA9Q86WD7 417 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 TRIM58Q8NG06 486 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 OR2L2Q8NH16 312 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 STYXQ8WUJ0 223 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 SNRNP27Q8WVK2 155 aaKnown RBP18.38■□□□□ 0.53
SREBF1-212ENST00000478616 SH3KBP1Q96B97 665 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 FCRL3Q96P31 734 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-212ENST00000478616 POT1Q9NUX5 634 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 SIDT1Q9NXL6 827 aaKnown RBP18.38■□□□□ 0.53
SREBF1-212ENST00000478616 PCDHGA3Q9Y5H0 932 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 B3GALT1Q9Y5Z6 326 aa18.38■□□□□ 0.53
SREBF1-212ENST00000478616 CFAP20Q9Y6A4 193 aaKnown RBP18.38■□□□□ 0.53
SREBF1-212ENST00000478616 SNRNP200O75643 2136 aaKnown RBP18.38■□□□□ 0.53
SREBF1-212ENST00000478616 TCRBV7S3A2A0A539 114 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-212ENST00000478616 PSMD3O43242 534 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 KIF1CO43896 1103 aaKnown RBP18.37■□□□□ 0.53
SREBF1-212ENST00000478616 VIPP01282 170 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 ACRV1P26436 265 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 FDFT1P37268 417 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 HADHAP40939 763 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 MAPK9P45984 424 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 PDE1BQ01064 536 aa18.37■□□□□ 0.53
SREBF1-212ENST00000478616 SEPT6Q14141 434 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms