RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 SLC38A9Q8NBW4 561 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 DTX3LQ8TDB6 740 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 ZNF514Q96K75 400 aaPredicted RBP12.51□□□□□ -0.41
TDP2-204ENST00000478507 MAP3K3Q99759 626 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 XPO4Q9C0E2 1151 aaKnown RBP12.51□□□□□ -0.41
TDP2-204ENST00000478507 SLC25A51Q9H1U9 297 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 IL26Q9NPH9 171 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 FGF21Q9NSA1 209 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 PCSK5Q92824 1860 aa12.51□□□□□ -0.41
TDP2-204ENST00000478507 TLCD2A6NGC4 264 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 KCNJ13O60928 360 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 NDST3O95803 873 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 MT-CYBP00156 380 aaPredicted RBP12.5□□□□□ -0.41
TDP2-204ENST00000478507 LPOP22079 712 aaPredicted RBP12.5□□□□□ -0.41
TDP2-204ENST00000478507 CA5AP35218 305 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 HMGCLP35914 325 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 CTSCP53634 463 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 ACY1Q03154 408 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 RPE65Q16518 533 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 PCSK7Q16549 785 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 IZUMO3Q5VZ72 239 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 VSIG1Q86XK7 387 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 TRAPPC5Q8IUR0 188 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 RASGEF1AQ8N9B8 481 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 Q8NA96 180 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 SPATA22Q8NHS9 363 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 ZNF501Q96CX3 271 aaPredicted RBP12.5□□□□□ -0.41
TDP2-204ENST00000478507 AGAP3Q96P47 875 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 CD180Q99467 661 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 SLC25A23Q9BV35 468 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 GPR63Q9BZJ6 419 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 ING2Q9H160 280 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 CUEDC1Q9NWM3 386 aaPredicted RBP12.5□□□□□ -0.41
TDP2-204ENST00000478507 TMEM63CQ9P1W3 806 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 UVRAGQ9P2Y5 699 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 TRIM10Q9UDY6 481 aa12.5□□□□□ -0.41
TDP2-204ENST00000478507 OR5K3A6NET4 321 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 SMTNL1A8MU46 457 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 GAPDHSO14556 408 aaPredicted RBP12.49□□□□□ -0.41
TDP2-204ENST00000478507 GPR39O43194 453 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 CPNE3O75131 537 aaKnown RBP12.49□□□□□ -0.41
TDP2-204ENST00000478507 VCLP18206 1134 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 HALP42357 657 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 PTGIRP43119 386 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 TUBB4BP68371 445 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 HSD11B2P80365 405 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 ZBED6P86452 979 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 GPS2Q13227 327 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 TUBB2AQ13885 445 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 IQCB1Q15051 598 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 PRR30Q53SZ7 412 aaPredicted RBP12.49□□□□□ -0.41
TDP2-204ENST00000478507 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 AMZ2Q86W34 360 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 TTC30BQ8N4P2 665 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 DDHD1Q8NEL9 900 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 BRSK1Q8TDC3 778 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 ZNF830Q96NB3 372 aaPredicted RBP12.49□□□□□ -0.41
TDP2-204ENST00000478507 LRFN5Q96NI6 719 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 SRPK1Q96SB4 655 aaKnown RBP12.49□□□□□ -0.41
TDP2-204ENST00000478507 TUBB2BQ9BVA1 445 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 CBX8Q9HC52 389 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 CAPN11Q9UMQ6 739 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 FARSAQ9Y285 508 aaKnown RBP12.49□□□□□ -0.41
TDP2-204ENST00000478507 HEY1Q9Y5J3 304 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 FER1L5A0AVI2 2057 aa12.49□□□□□ -0.41
TDP2-204ENST00000478507 LRBAP50851 2863 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 LOC285095A0A1B0GVY8 99 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 ARGFXA6NJG6 315 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 TCP11X1B4DZS4 312 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 POP7O75817 140 aaKnown RBP12.48□□□□□ -0.41
TDP2-204ENST00000478507 MTHFD1P11586 935 aaKnown RBP12.48□□□□□ -0.41
TDP2-204ENST00000478507 RORAP35398 523 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 RPS15P62841 145 aaKnown RBP12.48□□□□□ -0.41
TDP2-204ENST00000478507 AP1B1Q10567 949 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 NFE2L1Q14494 772 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 PDK1Q15118 436 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 NOMO1Q15155 1222 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 GPR19Q15760 415 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 CHRNA6Q15825 494 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 METRNLQ641Q3 311 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 LCN10Q6JVE6 187 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 JMJD6Q6NYC1 403 aaPredicted RBP12.48□□□□□ -0.41
TDP2-204ENST00000478507 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 CARFQ8N187 725 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 GBP4Q96PP9 640 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 CHST8Q9H2A9 424 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 GLOD4Q9HC38 313 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 IL17CQ9P0M4 197 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 CTTNBP2NLQ9P2B4 639 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 LCMT1Q9UIC8 334 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 PSMD13Q9UNM6 376 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 BTRCQ9Y297 605 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 PCDHGB7Q9Y5F8 929 aa12.48□□□□□ -0.41
TDP2-204ENST00000478507 DNMT3AQ9Y6K1 912 aaPredicted RBP12.48□□□□□ -0.41
TDP2-204ENST00000478507 POLEQ07864 2286 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms