RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MEN1O00255 615 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 MATN3O15232 486 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 RARAP10276 462 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 VCLP18206 1134 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 GRNP28799 593 aaKnown RBP19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 HALP42357 657 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 CDK18Q07002 472 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 RAPSNQ13702 412 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 ATP1A4Q13733 1029 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 GPR19Q15760 415 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 KHDC1Q4VXA5 237 aaKnown RBP19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 PLEKHS1Q5SXH7 462 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 FAM69BQ5VUD6 431 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 FAM198BQ6UWH4 519 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 DSELQ8IZU8 1212 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 ZBTB2Q8N680 514 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 ENOX1Q8TC92 643 aaKnown RBP19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 TEKT4Q8WW24 435 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 RBM22Q9NW64 420 aaKnown RBP eCLIP19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 TMEM63CQ9P1W3 806 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 TRIM10Q9UDY6 481 aa19.8■□□□□ 0.76
PDLIM1-202ENST00000477757 ARHGAP10A1A4S6 786 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 MTX2O75431 263 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 HLA-DQB2P05538 268 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 CAPN1P07384 714 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 RORAP35398 523 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 CRB2Q5IJ48 1285 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 IRF2BP2Q7Z5L9 587 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 UBE2Q2Q8WVN8 375 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 CPT1BQ92523 772 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 SGSM3Q96HU1 749 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 ILKAPQ9H0C8 392 aaPredicted RBP19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 ZFYVE1Q9HBF4 777 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 RAD18Q9NS91 495 aa19.79■□□□□ 0.76
PDLIM1-202ENST00000477757 UBA6A0AVT1 1052 aaPredicted RBP19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 OR5K3A6NET4 321 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 CDK14O94921 469 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 ZBTB11O95625 1053 aaPredicted RBP19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 BECN1Q14457 450 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 PLCL1Q15111 1095 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 TXNRD3NBQ6F5E7 133 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 IGFL3Q6UXB1 125 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 CARFQ8N187 725 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 INPP5DQ92835 1189 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 ZNF653Q96CK0 615 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 ERGIC2Q96RQ1 377 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 ADGRE3Q9BY15 652 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 UNKQ9C0B0 810 aaKnown RBP19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 NTNG1Q9Y2I2 539 aa19.78■□□□□ 0.76
PDLIM1-202ENST00000477757 HIVEP1P15822 2718 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 ALPPP05187 535 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 MMP2P08253 660 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 CCNCP24863 283 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 PER3P56645 1201 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 ABRQ12979 859 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 GALNT3Q14435 633 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 RPE65Q16518 533 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 IFI16Q16666 785 aaKnown RBP19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 LYPLAL1Q5VWZ2 237 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 RAB43Q86YS6 212 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 TRAPPC5Q8IUR0 188 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 ST6GALNAC3Q8NDV1 305 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 TSGA13Q96PP4 275 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 BTRCQ9Y297 605 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 PCDHGA10Q9Y5H3 936 aa19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 COPG1Q9Y678 874 aaKnown RBP19.77■□□□□ 0.76
PDLIM1-202ENST00000477757 DIDO1Q9BTC0 2240 aaKnown RBP19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 SLC4A1P02730 911 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 FTLP02792 175 aaPredicted RBP19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 CD86P42081 329 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 SLC25A11Q02978 314 aaKnown RBP19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 DMPKQ09013 629 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 NCF4Q15080 339 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 PAFAH1B3Q15102 231 aaKnown RBP19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 KYNUQ16719 465 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 TMTC4Q5T4D3 741 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 PRAMEF17Q5VTA0 474 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 NCBP2-AS2Q69YL0 99 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 MRGPREQ86SM8 312 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 SYTL1Q8IYJ3 562 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 VPS35Q96QK1 796 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 MRPL47Q9HD33 250 aaKnown RBP19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 PCMTD2Q9NV79 361 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 ITPR3Q14573 2671 aa19.76■□□□□ 0.75
PDLIM1-202ENST00000477757 TACC2O95359 2948 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 F5H423 210 aaPredicted RBP19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 KCNJ13O60928 360 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 GZMAP12544 262 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 UBXN1Q04323 297 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 MMRN1Q13201 1228 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 KRT81Q14533 505 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 MYBPC3Q14896 1274 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 ZRSR2Q15696 482 aaKnown RBP19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 TMC3Q7Z5M5 1100 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 OOSP2Q86WS3 158 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 CLIP3Q96DZ5 547 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 TRIB3Q96RU7 358 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 FANCEQ9HB96 536 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 HRASLS2Q9NWW9 162 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 SOHLH2Q9NX45 425 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms