RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 GPR156Q8NFN8 814 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 OR13J1Q8NGT2 312 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 UTP15Q8TED0 518 aaKnown RBP9.66□□□□□ -0.86
CMC1-209ENST00000477739 HAPLN3Q96S86 360 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 RTP3Q9BQQ7 232 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 RHNO1Q9BSD3 238 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 ZYG11BQ9C0D3 744 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 TNKS2Q9H2K2 1166 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 VPS28Q9UK41 221 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 IKZF3Q9UKT9 509 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 SPO11Q9Y5K1 396 aa9.66□□□□□ -0.86
CMC1-209ENST00000477739 CACNA1CQ13936 2221 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 DENRO43583 198 aaKnown RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 VPS26AO75436 327 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 PRKD3O94806 890 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 FAM163BP0C2L3 166 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 CCNA2P20248 432 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 ARCN1P48444 511 aaKnown RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 NUP107P57740 925 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 PM20D1Q6GTS8 502 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 CRTC3Q6UUV7 619 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 ZNF621Q6ZSS3 439 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 SERINC5Q86VE9 423 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 PIANPQ8IYJ0 282 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 SLC15A4Q8N697 577 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 C2CD4AQ8NCU7 369 aaPredicted RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 PGAP3Q96FM1 320 aaPredicted RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 ASIC4Q96FT7 647 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 CCDC28BQ9BUN5 200 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 POLR1EQ9GZS1 481 aaKnown RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 GABRQQ9UN88 632 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 Q9Y3F1 56 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 A0A0G2JMZ2 1700 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 F5H5T6 163 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 RGS5O15539 181 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 GLUD1P00367 558 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 OPN1SWP03999 348 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 IMPDH1P20839 514 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 AKT1P31749 480 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 HERVK_113P63132 956 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 CCDC85BQ15834 202 aaPredicted RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 NANOGP8Q6NSW7 305 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 GPRIN3Q6ZVF9 776 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 ERMP1Q7Z2K6 904 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 LIMS2Q7Z4I7 341 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 TMCO2Q7Z6W1 182 aaPredicted RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 SYVN1Q86TM6 617 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 EPHX4Q8IUS5 362 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 BBS5Q8N3I7 341 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 RTL3Q8N8U3 475 aaKnown RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 STAG3L4Q8TBR4 150 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 UBE2FQ969M7 185 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 ERVK-6Q9BXR3 956 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 DPY30Q9C005 99 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 TUBB1Q9H4B7 451 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 NANOGQ9H9S0 305 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 MRPL40Q9NQ50 206 aaKnown RBP9.65□□□□□ -0.86
CMC1-209ENST00000477739 SLC8A2Q9UPR5 921 aa9.65□□□□□ -0.86
CMC1-209ENST00000477739 NADKO95544 446 aaPredicted RBP9.65□□□□□ -0.87
CMC1-209ENST00000477739 S1PR4O95977 384 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 MATN1P21941 496 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 ATN1P54259 1190 aaPredicted RBP9.65□□□□□ -0.87
CMC1-209ENST00000477739 NFE2Q16621 373 aaPredicted RBP9.65□□□□□ -0.87
CMC1-209ENST00000477739 MAPKAPK3Q16644 382 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 CST9Q5W186 159 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 FAM91A1Q658Y4 838 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 HMGN2P46Q86SG4 172 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 ADGRG6Q86SQ4 1221 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 ZNF554Q86TJ5 538 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 IFNL1Q8IU54 200 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 CHERPQ8IWX8 916 aaKnown RBP9.65□□□□□ -0.87
CMC1-209ENST00000477739 ATP6V0D2Q8N8Y2 350 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 TRPV1Q8NER1 839 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 TRIB2Q92519 343 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 FAM120BQ96EK7 910 aaKnown RBP9.65□□□□□ -0.87
CMC1-209ENST00000477739 GLT1D1Q96MS3 346 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 BDH2Q9BUT1 245 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 TLR8Q9NR97 1041 aaKnown RBP9.65□□□□□ -0.87
CMC1-209ENST00000477739 DDX28Q9NUL7 540 aaKnown RBP9.65□□□□□ -0.87
CMC1-209ENST00000477739 CRLS1Q9UJA2 301 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 PHF24Q9UPV7 400 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 COQ6Q9Y2Z9 468 aa9.65□□□□□ -0.87
CMC1-209ENST00000477739 A6NL46 340 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 A8MV72 311 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 K7ERQ8 282 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PTNP21246 168 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 OXCT1P55809 520 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 DMC1Q14565 340 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 ACAP2Q15057 778 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 SMN1Q16637 294 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 SPANXN4Q5MJ08 99 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 RGMBQ6NW40 437 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 SLCO6A1Q86UG4 719 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 MON1AQ86VX9 555 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PLD3Q8IV08 490 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 TMEM151AQ8N4L1 468 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 CCDC126Q96EE4 140 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PRKD2Q9BZL6 878 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms