RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 BCL7AQ4VC05 210 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 TMEM164Q5U3C3 297 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 METRNLQ641Q3 311 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 SNX20Q7Z614 316 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 LINC00523Q86TU6 105 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 DTX1Q86Y01 620 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 NCSTNQ92542 709 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 ULK4Q96C45 1275 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 ALS2CR12Q96Q35 445 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 UBL7Q96S82 380 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-211ENST00000477612 NLE1Q9NVX2 485 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-211ENST00000477612 OGFRQ9NZT2 677 aa21.35■■□□□ 1.01
COL9A3-211ENST00000477612 SMG1Q96Q15 3661 aaKnown RBP21.34■■□□□ 1.01
COL9A3-211ENST00000477612 MGAT4DA6NG13 374 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 OR2AG2A6NM03 316 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 SUN1O94901 812 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 C9P02748 559 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 FDFT1P37268 417 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 ARSDP51689 593 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 DRG2P55039 364 aaKnown RBP21.34■■□□□ 1.01
COL9A3-211ENST00000477612 VAC14Q08AM6 782 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 SEPT7Q16181 437 aaKnown RBP21.34■■□□□ 1.01
COL9A3-211ENST00000477612 DRICH1Q6PGQ1 229 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-211ENST00000477612 PLXDC1Q8IUK5 500 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 TRIM48Q8IWZ4 208 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 NXPE1Q8N323 547 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 BMPERQ8N8U9 685 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 TRIM58Q8NG06 486 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 STYXQ8WUJ0 223 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 HEXDCQ8WVB3 486 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 SGF29Q96ES7 293 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 BBC3Q96PG8 261 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-211ENST00000477612 DDA1Q9BW61 102 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 CPNE5Q9HCH3 593 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 LZTFL1Q9NQ48 299 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.34■■□□□ 1.01
COL9A3-211ENST00000477612 FOXJ2Q9P0K8 574 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 SLC30A1Q9Y6M5 507 aa21.34■■□□□ 1.01
COL9A3-211ENST00000477612 IGLV3-16A0A075B6K0 115 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 OR52A4PA6NMU1 304 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 K7ENP7 123 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 AGRPO00253 132 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 UBXN7O94888 489 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 ANKRD34CP0C6C1 535 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 ITGALP20701 1170 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 AKT1P31749 480 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 HALP42357 657 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 NFE2L1Q14494 772 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 CCNG2Q16589 344 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 FNBP1LQ5T0N5 605 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 INO80CQ6PI98 192 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-211ENST00000477612 XKR5Q6UX68 686 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 FAM83HQ6ZRV2 1179 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-211ENST00000477612 LSM14AQ8ND56 463 aaKnown RBP21.33■■□□□ 1.01
COL9A3-211ENST00000477612 OR2L2Q8NH16 312 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 C1orf54Q8WWF1 131 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 CDKN2AIPNLQ96HQ2 116 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 DNAJC1Q96KC8 554 aaKnown RBP21.33■■□□□ 1.01
COL9A3-211ENST00000477612 CCNL2Q96S94 520 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-211ENST00000477612 TLR10Q9BXR5 811 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 RAB33BQ9H082 229 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 ETNK1Q9HBU6 452 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 OCIAD1Q9NX40 245 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 CRLS1Q9UJA2 301 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 ZNF148Q9UQR1 794 aa21.33■■□□□ 1.01
COL9A3-211ENST00000477612 DRG1Q9Y295 367 aaKnown RBP21.33■■□□□ 1.01
COL9A3-211ENST00000477612 MROH6A6NGR9 719 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 EFSO43281 561 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 TPH1P17752 444 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 MC4RP32245 332 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 TMPRSS15P98073 1019 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 BEND7Q8N7W2 519 aaPredicted RBP21.32■■□□□ 1
COL9A3-211ENST00000477612 CXorf40BQ96DE9 158 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 COPS8Q99627 209 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 EPHA6Q9UF33 1036 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 ACSL5Q9ULC5 683 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 ZKSCAN5Q9Y2L8 839 aa21.32■■□□□ 1
COL9A3-211ENST00000477612 ATMQ13315 3056 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 C17orf113A0A1B0GUU1 675 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 TOX3O15405 576 aaPredicted RBP21.31■■□□□ 1
COL9A3-211ENST00000477612 RALBP11234 206 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 ATP1B2P14415 290 aaPredicted RBP21.31■■□□□ 1
COL9A3-211ENST00000477612 PRLHRP49683 370 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 RAB15P59190 212 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 MC2RQ01718 297 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 CDH17Q12864 832 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 SEMA5AQ13591 1074 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 GPR18Q14330 331 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 POU6F1Q14863 301 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 TGIF1Q15583 401 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 RPE65Q16518 533 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 ZFAND4Q86XD8 727 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 ZFPM2Q8WW38 1151 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 C9orf72Q96LT7 481 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 ASPSCR1Q9BZE9 553 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 FBXO8Q9NRD0 319 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 ZDHHC3Q9NYG2 299 aa21.31■■□□□ 1
COL9A3-211ENST00000477612 EFCAB7A8K855 629 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 A8MU76 341 aa21.3■■□□□ 1
COL9A3-211ENST00000477612 TK2O00142 265 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms