RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TRIM48Q8IWZ4 208 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 KLHDC8BQ8IXV7 354 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 CACNA2D3Q8IZS8 1091 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 EXD3Q8N9H8 876 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 ZSCAN1Q8NBB4 408 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 CCDC110Q8TBZ0 833 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 RTP4Q96DX8 246 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 MED8Q96G25 268 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 ZNF514Q96K75 400 aaPredicted RBP10.6□□□□□ -0.71
SEC13-214ENST00000476597 C9orf72Q96LT7 481 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 SPATA13Q96N96 652 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 CTRCQ99895 268 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 FAM118BQ9BPY3 351 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 APOL2Q9BQE5 337 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 ZCCHC2Q9C0B9 1178 aaKnown RBP10.6□□□□□ -0.71
SEC13-214ENST00000476597 ARNT2Q9HBZ2 717 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 TRIM10Q9UDY6 481 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 KLHL3Q9UH77 587 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 PILRAQ9UKJ1 303 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 AMFRQ9UKV5 643 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 KCTD3Q9Y597 815 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 PCDHGA4Q9Y5G9 962 aa10.6□□□□□ -0.71
SEC13-214ENST00000476597 SETXQ7Z333 2677 aaKnown RBP10.6□□□□□ -0.71
SEC13-214ENST00000476597 MN1Q10571 1320 aaPredicted RBP10.59□□□□□ -0.71
SEC13-214ENST00000476597 SPTA1P02549 2419 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 MACROD2A1Z1Q3 448 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 MIF4GDA9UHW6 222 aaKnown RBP10.59□□□□□ -0.71
SEC13-214ENST00000476597 CAPN5O15484 640 aaPredicted RBP10.59□□□□□ -0.71
SEC13-214ENST00000476597 DDX3YO15523 660 aaKnown RBP10.59□□□□□ -0.71
SEC13-214ENST00000476597 RAD1O60671 282 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 ZNF189O75820 626 aaPredicted RBP10.59□□□□□ -0.71
SEC13-214ENST00000476597 SRP72O76094 671 aaKnown RBP10.59□□□□□ -0.71
SEC13-214ENST00000476597 PRAMEF1O95521 474 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 CRTAMO95727 393 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 AMD1P17707 334 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 MSH3P20585 1137 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 HALP42357 657 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 KIF5AQ12840 1032 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 GPR18Q14330 331 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 RPE65Q16518 533 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 LONRF2Q1L5Z9 754 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 METRNLQ641Q3 311 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 KIAA1328Q86T90 577 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 SYCE1Q8N0S2 351 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 IL22RA1Q8N6P7 574 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 UBL4BQ8N7F7 174 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 OR4K2Q8NGD2 314 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 CXorf40BQ96DE9 158 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 PPP1R2P1Q96PQ5 205 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 C19orf43Q9BQ61 176 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 SLC12A9Q9BXP2 914 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 ASB8Q9H765 288 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 APMAPQ9HDC9 416 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 SIDT1Q9NXL6 827 aaKnown RBP10.59□□□□□ -0.71
SEC13-214ENST00000476597 IMPACTQ9P2X3 320 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 EPHA6Q9UF33 1036 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 FKBPLQ9UIM3 349 aa10.59□□□□□ -0.71
SEC13-214ENST00000476597 A0A0U1RQJ8 604 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 GOLGA6L9A6NEM1 432 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 MGAT4DA6NG13 374 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 OR2AG2A6NM03 316 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 POLR1CO15160 346 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 MAP4P27816 1152 aaKnown RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 CDC25BP30305 580 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 CAPZBP47756 277 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 LEPRP48357 1165 aaKnown RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 CYP4F2P78329 520 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 PDE1BQ01064 536 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 KLF1Q13351 362 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 NFE2L1Q14494 772 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 SPARCL1Q14515 664 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 TBR1Q16650 682 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 PARP6Q2NL67 630 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 FNBP1LQ5T0N5 605 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 KCTD11Q693B1 232 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 FAM83HQ6ZRV2 1179 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 TIPARPQ7Z3E1 657 aaKnown RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 TXLNBQ8N3L3 684 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 BEND7Q8N7W2 519 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 OR13C4Q8NGS5 318 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 KLHL6Q8WZ60 621 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 RSC1A1Q92681 617 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 EXTL1Q92935 676 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 LINC00615Q96LM1 132 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 TGM7Q96PF1 710 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 INSM2Q96T92 566 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 TBL1YQ9BQ87 522 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 RAB33BQ9H082 229 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 FEZ2Q9UHY8 353 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 PACSIN2Q9UNF0 486 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 PSMD13Q9UNM6 376 aa10.58□□□□□ -0.72
SEC13-214ENST00000476597 TMEM184BQ9Y519 407 aaPredicted RBP10.58□□□□□ -0.72
SEC13-214ENST00000476597 SCN8AQ9UQD0 1980 aa10.57□□□□□ -0.72
SEC13-214ENST00000476597 BSNQ9UPA5 3926 aa10.57□□□□□ -0.72
SEC13-214ENST00000476597 KLHL33A6NCF5 533 aa10.57□□□□□ -0.72
SEC13-214ENST00000476597 B8ZZF3 427 aa10.57□□□□□ -0.72
SEC13-214ENST00000476597 LDB2O43679 373 aa10.57□□□□□ -0.72
SEC13-214ENST00000476597 SGTAO43765 313 aa10.57□□□□□ -0.72
SEC13-214ENST00000476597 KIF1CO43896 1103 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms