RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 SETXQ7Z333 2677 aaKnown RBP14.19□□□□□ -0.14
ABCF3-211ENST00000475728 KNTC1P50748 2209 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 TRBV23OR9-2A0A075B6M9 112 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 C17orf113A0A1B0GUU1 675 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 SDR42E2A6NKP2 422 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 NDC80O14777 642 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 PFDN6O15212 129 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 PPM1DO15297 605 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 CPNE6O95741 557 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 GOT2P00505 430 aaKnown RBP14.19□□□□□ -0.14
ABCF3-211ENST00000475728 VIPP01282 170 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 XRCC1P18887 633 aaPredicted RBP14.19□□□□□ -0.14
ABCF3-211ENST00000475728 PAMP19021 973 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 MGAT1P26572 445 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 FOXN2P32314 431 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 CA5AP35218 305 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 PRLHRP49683 370 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 EPHA4P54764 986 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 CLDN6P56747 220 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 B4GALNT1Q00973 533 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 DBN1Q16643 649 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 MAP9Q49MG5 647 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.19□□□□□ -0.14
ABCF3-211ENST00000475728 CASC4Q6P4E1 433 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 PACS1Q6VY07 963 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 PIM3Q86V86 326 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 PIANPQ8IYJ0 282 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 MPP5Q8N3R9 675 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 OR10G6Q8NH81 332 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 HM13Q8TCT9 377 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 CXorf40BQ96DE9 158 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 AHCYL2Q96HN2 611 aaKnown RBP14.19□□□□□ -0.14
ABCF3-211ENST00000475728 TMEM121BQ9BXQ6 578 aaPredicted RBP14.19□□□□□ -0.14
ABCF3-211ENST00000475728 CCDC86Q9H6F5 360 aaKnown RBP14.19□□□□□ -0.14
ABCF3-211ENST00000475728 UCK1Q9HA47 277 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 POT1Q9NUX5 634 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 KCNK4Q9NYG8 393 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 DKK4Q9UBT3 224 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 SLC2A6Q9UGQ3 507 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 SOX13Q9UN79 622 aa14.19□□□□□ -0.14
ABCF3-211ENST00000475728 ZNF106Q9H2Y7 1883 aaKnown RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 A0A1W2PQM1 296 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 TCRBV7S3A2A0A539 114 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 LILRA5A6NI73 299 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 SMAPO00193 183 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 DUX1O43812 170 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 EML2O95834 649 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 FTH1P02794 183 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 PBLDP30039 288 aaPredicted RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 PPM1FP49593 454 aaPredicted RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 TTPAP49638 278 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 CDKN1CP49918 316 aaPredicted RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 TERF1P54274 439 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 INHBCP55103 352 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 OR1D5P58170 312 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 UBE2IP63279 158 aaKnown RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 DR1Q01658 176 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 EIF3IQ13347 325 aaKnown RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 SQSTM1Q13501 440 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 DHX34Q14147 1143 aaKnown RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 RTP5Q14D33 572 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 AMZ1Q400G9 498 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 METRNLQ641Q3 311 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 SYT10Q6XYQ8 523 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 ZNF534Q76KX8 674 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 HOOK3Q86VS8 718 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 KLHL7Q8IXQ5 586 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 LSMEM2Q8N112 164 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 ZNF778Q96MU6 729 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 CCM2Q9BSQ5 444 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 TSSK1BQ9BXA7 367 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 TREX1Q9NSU2 369 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 CATSPERZQ9NTU4 200 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 SYBUQ9NX95 663 aa14.18□□□□□ -0.14
ABCF3-211ENST00000475728 AKAP7Q9P0M2 348 aaPredicted RBP14.18□□□□□ -0.14
ABCF3-211ENST00000475728 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 IGHV1OR21-1A0A087WYE8 117 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 DNALI1O14645 258 aaPredicted RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 B4GAT1O43505 415 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 TMEM63AO94886 807 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 SLC35G4P0C7Q5 338 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 OR56A5P0C7T3 313 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 RPL10P27635 214 aaKnown RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 CCKBRP32239 447 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 DRG2P55039 364 aaKnown RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 CRADDP78560 199 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 RPA4Q13156 261 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 NFE2L1Q14494 772 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 SEPT7Q16181 437 aaKnown RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 ANKRD22Q5VYY1 191 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 MRNIPQ6NTE8 343 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 SDCCAG8Q86SQ7 713 aaPredicted RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 CAND1Q86VP6 1230 aaKnown RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 MARCH9Q86YJ5 346 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 C17orf53Q8N3J3 647 aaPredicted RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 NAT8LQ8N9F0 302 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 KDF1Q8NAX2 398 aaPredicted RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 ZCCHC14Q8WYQ9 949 aaKnown RBP14.17□□□□□ -0.14
ABCF3-211ENST00000475728 TMEM159Q96B96 161 aa14.17□□□□□ -0.14
ABCF3-211ENST00000475728 TRIM44Q96DX7 344 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms