RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ABHD18Q0P651 414 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 MAP7Q14244 749 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 GPR18Q14330 331 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 TAF1AQ15573 450 aaPredicted RBP19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 LONRF2Q1L5Z9 754 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 GPRC6AQ5T6X5 926 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 CYB5D1Q6P9G0 228 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 BORAQ6PGQ7 559 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 RASGEF1AQ8N9B8 481 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 LRRC45Q96CN5 670 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 SLC45A3Q96JT2 553 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 FICDQ9BVA6 458 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 RAB33BQ9H082 229 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 ZNF768Q9H5H4 540 aaKnown RBP19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 UGT1A7Q9HAW7 530 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 UGT1A10Q9HAW8 530 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 UGT1A8Q9HAW9 530 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 STARD5Q9NSY2 213 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 SIDT1Q9NXL6 827 aaKnown RBP19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 TRIM10Q9UDY6 481 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 EPHA6Q9UF33 1036 aa19.98■□□□□ 0.79
PDLIM4-206ENST00000474421 C5orf60A6NFR6 353 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 SOWAHDA6NJG2 315 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 RASSF9O75901 435 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 AGTP01019 485 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 FAM87AP0C7U9 286 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 MSH3P20585 1137 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 AKT1P31749 480 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 EIF3EP60228 445 aaKnown RBP19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 FOXM1Q08050 763 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 NFATC3Q12968 1075 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 IL11RAQ14626 422 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 CLCA4Q14CN2 919 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 KLHL35Q6PF15 583 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 TMEM220Q6QAJ8 160 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 RANBP10Q6VN20 620 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 PRSS42Q7Z5A4 293 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 ESX1Q8N693 406 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 ZNF398Q8TD17 642 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 ADNPQ9H2P0 1102 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 APMAPQ9HDC9 416 aa19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 TLN1Q9Y490 2541 aaKnown RBP19.97■□□□□ 0.79
PDLIM4-206ENST00000474421 GAPDHSO14556 408 aaPredicted RBP19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 BUD23O43709 281 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 SLC28A2O43868 658 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 PRAMEF1O95521 474 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 RBP3P10745 1247 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 CTSCP53634 463 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 MC1RQ01726 317 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 ANKRD20A2Q5SQ80 823 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 ANKRD20A1Q5TYW2 823 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 ANKRD20A3Q5VUR7 823 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 DARS2Q6PI48 645 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 BEND7Q8N7W2 519 aaPredicted RBP19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 C19orf43Q9BQ61 176 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 C10orf88Q9H8K7 445 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 GEMIN8Q9NWZ8 242 aaKnown RBP19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 FEZ2Q9UHY8 353 aaPredicted RBP19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 WDR37Q9Y2I8 494 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 ARL5AQ9Y689 179 aa19.96■□□□□ 0.79
PDLIM4-206ENST00000474421 RCCD1A6NED2 376 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 OR2AG2A6NM03 316 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 KCNN4O15554 427 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 CRTAMO95727 393 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 DLGAP3O95886 979 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 PYGMP11217 842 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 PSMB4P28070 264 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 ADRA1AP35348 466 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 LEPRP48357 1165 aaKnown RBP19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 SEPHS1P49903 392 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 RPE65Q16518 533 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 CACHD1Q5VU97 1274 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 METRNLQ641Q3 311 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 TIPARPQ7Z3E1 657 aaKnown RBP19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 TXLNBQ8N3L3 684 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 OR4K2Q8NGD2 314 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 RSC1A1Q92681 617 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 SPATA13Q96N96 652 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 ULBP3Q9BZM4 244 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 ACSL5Q9ULC5 683 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 DUSP10Q9Y6W6 482 aa19.95■□□□□ 0.78
PDLIM4-206ENST00000474421 GPR39O43194 453 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 SRP72O76094 671 aaKnown RBP19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 RALBP11234 206 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 ITGB6P18564 788 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 VAV2P52735 878 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 FNBP1LQ5T0N5 605 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 IRGCQ6NXR0 463 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 PRICKLE2Q7Z3G6 844 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 ZFPM2Q8WW38 1151 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 KLHL6Q8WZ60 621 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 OR6C1Q96RD1 312 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 GORASP1Q9BQQ3 440 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 ASB8Q9H765 288 aa19.94■□□□□ 0.78
PDLIM4-206ENST00000474421 LOC101059948A0A1B0GTJ6 334 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 GOLGA6L9A6NEM1 432 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 MGAT4DA6NG13 374 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 HADHAP40939 763 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 STAT5AP42229 794 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms