RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 UBA6A0AVT1 1052 aaPredicted RBP17.83■□□□□ 0.44
SNRPB-203ENST00000474384 B4DGG1 531 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 SNX2O60749 519 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 CSRP1P21291 193 aaKnown RBP17.83■□□□□ 0.44
SNRPB-203ENST00000474384 CUL1Q13616 776 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 PROX2Q3B8N5 592 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 LMNTD2Q8IXW0 634 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 GSDMBQ8TAX9 411 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 CALML6Q8TD86 181 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 ZDHHC1Q8WTX9 485 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 CNDP2Q96KP4 475 aaKnown RBP17.83■□□□□ 0.44
SNRPB-203ENST00000474384 LINC00615Q96LM1 132 aaPredicted RBP17.83■□□□□ 0.44
SNRPB-203ENST00000474384 C9orf72Q96LT7 481 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 CCM2Q9BSQ5 444 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 FAM167BQ9BTA0 163 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 DLL3Q9NYJ7 618 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 FAM8A1Q9UBU6 413 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 TBC1D29Q9UFV1 150 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 NFU1Q9UMS0 254 aa17.83■□□□□ 0.44
SNRPB-203ENST00000474384 ZFC3H1O60293 1989 aaKnown RBP17.82■□□□□ 0.44
SNRPB-203ENST00000474384 DCDC2BA2VCK2 349 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 MGAT4DA6NG13 374 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 PRR19A6NJB7 356 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 PRMT5O14744 637 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-203ENST00000474384 PFDN6O15212 129 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 EML2O95834 649 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 S1PR4O95977 384 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 OR56A5P0C7T3 313 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 VCLP18206 1134 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 SSTR1P30872 391 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 SLC1A2P43004 574 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 CLCNKAP51800 687 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 NFE2L1Q14494 772 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 TRIP6Q15654 476 aaKnown RBP17.82■□□□□ 0.44
SNRPB-203ENST00000474384 ZNF789Q5FWF6 425 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 RNF187Q5TA31 235 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-203ENST00000474384 OGFOD3Q6PK18 319 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 FAM83HQ6ZRV2 1179 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-203ENST00000474384 SLC35F3Q8IY50 421 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 FAM181AQ8N9Y4 354 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 OR2L2Q8NH16 312 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 LPGAT1Q92604 370 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 FMO2Q99518 471 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 CDC6Q99741 560 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 P2RY12Q9H244 342 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 PRDM8Q9NQV8 689 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 FBXO6Q9NRD1 293 aaPredicted RBP17.82■□□□□ 0.44
SNRPB-203ENST00000474384 FBXO5Q9UKT4 447 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 CRYL1Q9Y2S2 319 aa17.82■□□□□ 0.44
SNRPB-203ENST00000474384 TRBV23OR9-2A0A075B6M9 112 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 QSOX1O00391 747 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 GIPC1O14908 333 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 KCNJ13O60928 360 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 IDSP22304 550 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 FMO4P31512 558 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 EIF3BP55884 814 aaKnown RBP17.81■□□□□ 0.44
SNRPB-203ENST00000474384 GPX6P59796 221 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 MPP1Q00013 466 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 DMPKQ09013 629 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 DNAJC3Q13217 504 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 FRG1Q14331 258 aaKnown RBP17.81■□□□□ 0.44
SNRPB-203ENST00000474384 TEDDM1Q5T9Z0 273 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 PTRHD1Q6GMV3 140 aaKnown RBP17.81■□□□□ 0.44
SNRPB-203ENST00000474384 C3orf62Q6ZUJ4 267 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 CFAP206Q8IYR0 622 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 NAGSQ8N159 534 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 ARL10Q8N8L6 244 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 KYQ8NBH2 561 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 PATE1Q8WXA2 126 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 GLMNQ92990 594 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 INTS10Q9NVR2 710 aaKnown RBP17.81■□□□□ 0.44
SNRPB-203ENST00000474384 MOCS1Q9NZB8 636 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 SLC17A6Q9P2U8 582 aa17.81■□□□□ 0.44
SNRPB-203ENST00000474384 ARHGEF17Q96PE2 2063 aaPredicted RBP17.81■□□□□ 0.44
SNRPB-203ENST00000474384 COL5A1P20908 1838 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-203ENST00000474384 PIKFYVEQ9Y2I7 2098 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 LY6G6EA0A0G2JKS1 128 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 IQCF5A8MTL0 148 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 TNFSF14O43557 240 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 NOBOXO60393 691 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 HAUS5O94927 633 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 FTH1P02794 183 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 ITGB6P18564 788 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 RPS3P23396 243 aaKnown RBP eCLIP17.8■□□□□ 0.442e-14■■■■■ 31.9
SNRPB-203ENST00000474384 RPL10P27635 214 aaKnown RBP17.8■□□□□ 0.44
SNRPB-203ENST00000474384 NOVA1P51513 510 aaKnown RBP17.8■□□□□ 0.44
SNRPB-203ENST00000474384 DAB2P98082 770 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 MGAT5Q09328 741 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 NR0B2Q15466 257 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 SEPT7Q16181 437 aaKnown RBP17.8■□□□□ 0.44
SNRPB-203ENST00000474384 METRNLQ641Q3 311 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 XKR5Q6UX68 686 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 LRRC6Q86X45 466 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 CNTN4Q8IWV2 1026 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 KRT222Q8N1A0 295 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 LILRA3Q8N6C8 439 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-203ENST00000474384 C2CD4AQ8NCU7 369 aaPredicted RBP17.8■□□□□ 0.44
SNRPB-203ENST00000474384 GPR156Q8NFN8 814 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 GABPB2Q8TAK5 448 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms