RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PPARDQ03181 441 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 HSPA14Q0VDF9 509 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 ACAP2Q15057 778 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 PLA2G4EQ3MJ16 856 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 BCL7AQ4VC05 210 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 WDR45BQ5MNZ6 344 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 PLEKHS1Q5SXH7 462 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 CWF19L1Q69YN2 538 aaKnown RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 TTC23LQ6PF05 361 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 PAQR3Q6TCH7 311 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 LPCAT2Q7L5N7 544 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 ADGRG6Q86SQ4 1221 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 ADAMTSL2Q86TH1 951 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 NUDCD3Q8IVD9 361 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 CPNE9Q8IYJ1 553 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 PNPLA1Q8N8W4 532 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 RASGEF1AQ8N9B8 481 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 CADM4Q8NFZ8 388 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 STAG3L4Q8TBR4 150 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 CD200R1Q8TD46 325 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 EXT2Q93063 718 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 WDR92Q96MX6 357 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 MRPL57Q9BQC6 102 aaKnown RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 TEX101Q9BY14 249 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 FAM126AQ9BYI3 521 aaPredicted RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 DERL2Q9GZP9 239 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 NSRP1Q9H0G5 558 aaKnown RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 MIR1-1HGQ9H1L0 117 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 C6orf106Q9H6K1 298 aaPredicted RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 MLXIPLQ9NP71 852 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 CD93Q9NPY3 652 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 MBNL1Q9NR56 388 aaKnown RBP10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 FAM53CQ9NYF3 392 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 KLHL42Q9P2K6 505 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 KLQ9UEF7 1012 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 TMCO1Q9UM00 188 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 GPR34Q9UPC5 381 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 PLLPQ9Y342 182 aa10.12□□□□□ -0.79
PRPF38A-202ENST00000474048 CCDC163A0A0D9SF12 145 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 SUPT3HB4E1H0 165 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 IFRD1O00458 451 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 GRID2O43424 1007 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 LATO43561 262 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 SUPT3HO75486 399 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 SOD1P00441 154 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 PDGFBP01127 241 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 RPN2P04844 631 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 HIST1H2AGP0C0S8 130 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 GFAPP14136 432 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 CPA3P15088 417 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 CREB1P16220 341 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ZNF8P17098 575 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 HIST1H2ADP20671 130 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 CYP2A7P20853 494 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 MDH1P40925 334 aaKnown RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 GNGT1P63211 74 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 B4GALNT1Q00973 533 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 CSTF1Q05048 431 aaKnown RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 NFATC4Q14934 902 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ZNF648Q5T619 568 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ATG16L1Q676U5 607 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ENPP7Q6UWV6 458 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 MAMSTRQ6ZN01 415 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 AMZ2Q86W34 360 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 SLC22A9Q8IVM8 553 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ACVR1CQ8NER5 493 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 OR56A4Q8NGH8 313 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 MDM1Q8TC05 714 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 HM13Q8TCT9 377 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 GLMNQ92990 594 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 CENPTQ96BT3 561 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 BIRC7Q96CA5 298 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 NXNL1Q96CM4 212 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 COX14Q96I36 57 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 HIST1H2AHQ96KK5 128 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 HIST1H2AJQ99878 128 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 H2AFJQ9BTM1 129 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 OSGEPL1Q9H4B0 414 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ALG9Q9H6U8 611 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 CPSF2Q9P2I0 782 aaKnown RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 SLC17A7Q9P2U7 560 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ATXN10Q9UBB4 475 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 XPR1Q9UBH6 696 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 INVSQ9Y283 1065 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 TMEM98Q9Y2Y6 226 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 GPSM3Q9Y4H4 160 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 HS3ST3A1Q9Y663 406 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 DNMT3AQ9Y6K1 912 aaPredicted RBP10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 PRSS21Q9Y6M0 314 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 EYSQ5T1H1 3165 aa10.11□□□□□ -0.79
PRPF38A-202ENST00000474048 PIKFYVEQ9Y2I7 2098 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 A0A1W2PPC4 97 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 WDR91A4D1P6 747 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 NPEPPSL1A6NEC2 478 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 H3BM21 787 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 RAD51BO15315 384 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 BIRC5O15392 142 aa10.1□□□□□ -0.79
PRPF38A-202ENST00000474048 NUAK1O60285 661 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms