RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 PSMD13Q9UNM6 376 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 TCAF1Q9Y4C2 921 aa13.96□□□□□ -0.17
VAMP4-203ENST00000474047 CTAGE9A4FU28 777 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TAF4O00268 1085 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TNFSF15O95150 251 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 CAPNS1P04632 268 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 POLBP06746 335 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TPSB2P20231 275 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 PPARGP37231 505 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 SLC19A1P41440 591 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 ARSDP51689 593 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 PDX1P52945 283 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 EPHA4P54764 986 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 DMPKQ09013 629 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 PPP1R7Q15435 360 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TPSAB1Q15661 275 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 KCTD19Q17RG1 926 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 BCL7AQ4VC05 210 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 LYPLAL1Q5VWZ2 237 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 AFTPHQ6ULP2 937 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 CFAP206Q8IYR0 622 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 OR2L2Q8NH16 312 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 NCSTNQ92542 709 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 FGF11Q92914 225 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TMEM159Q96B96 161 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 CMKLR1Q99788 373 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 NUDT22Q9BRQ3 303 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 SEMA6CQ9H3T2 930 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 THSD1Q9NS62 852 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 ZNF624Q9P2J8 865 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 SLC2A6Q9UGQ3 507 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 ACSL5Q9ULC5 683 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 RIMKLBQ9ULI2 386 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 IGF2RP11717 2491 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TRBV5-4A0A0C4DH59 114 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 OR51F1A6NGY5 319 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 OR52A4PA6NMU1 304 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 F8W8V4 182 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 PLD2O14939 933 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 RRP8O43159 456 aaKnown RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 GOT2P00505 430 aaKnown RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 SLC35G4P0C7Q5 338 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 PRSS56P0CW18 603 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 AMD1P17707 334 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 FNTAP49354 379 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 UBE2IP63279 158 aaKnown RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 CRADDP78560 199 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 ZFP36L1Q07352 338 aaKnown RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 KRT33BQ14525 404 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TBC1D25Q3MII6 688 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 FASTKD1Q53R41 847 aaKnown RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 SNAP47Q5SQN1 464 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 LRRC8BQ6P9F7 803 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 LRRC69Q6ZNQ3 347 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 JAMLQ86YT9 394 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 OR4D9Q8NGE8 314 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 ZNF578Q96N58 590 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-203ENST00000474047 CCM2Q9BSQ5 444 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 EPB41L1Q9H4G0 881 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 CHRAC1Q9NRG0 131 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 POT1Q9NUX5 634 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 LOXL2Q9Y4K0 774 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 PCDHGA8Q9Y5G5 932 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 SAR1BQ9Y6B6 198 aa13.95□□□□□ -0.18
VAMP4-203ENST00000474047 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.94□□□□□ -0.18
VAMP4-203ENST00000474047 BRAFP15056 766 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 MPSTP25325 297 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 MGAT1P26572 445 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 NSG1P42857 185 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 PAFAH1B1P43034 410 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 PRLHRP49683 370 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 CLCA4Q14CN2 919 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 DBN1Q16643 649 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 METRNLQ641Q3 311 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 CASC4Q6P4E1 433 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 TMEM71Q6P5X7 295 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 FAM83HQ6ZRV2 1179 aaPredicted RBP13.94□□□□□ -0.18
VAMP4-203ENST00000474047 TMEM26Q6ZUK4 368 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 SLITRK4Q8IW52 837 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 RBM12BQ8IXT5 1001 aaKnown RBP13.94□□□□□ -0.18
VAMP4-203ENST00000474047 PIANPQ8IYJ0 282 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 OTUD6BQ8N6M0 293 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 OR13J1Q8NGT2 312 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 OR4L1Q8NH43 312 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 PEX13Q92968 403 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 CCDC74BQ96LY2 380 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 ZNF778Q96MU6 729 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 SLC46A1Q96NT5 459 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 TBC1D10AQ9BXI6 508 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 WWP1Q9H0M0 922 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 IMP3Q9NV31 184 aaKnown RBP13.94□□□□□ -0.18
VAMP4-203ENST00000474047 SAMD15Q9P1V8 674 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 PISDQ9UG56 409 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 WDR37Q9Y2I8 494 aa13.94□□□□□ -0.18
VAMP4-203ENST00000474047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
VAMP4-203ENST00000474047 KIF26BQ2KJY2 2108 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 SPEGQ15772 3267 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 IGHV5-10-1A0A0J9YXX1 117 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 A8MU76 341 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms