RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GLIS1Q8NBF1 620 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SIDT2Q8NBJ9 832 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 LPCAT1Q8NF37 534 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 UBXN4Q92575 508 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 MAML1Q92585 1016 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 HSPH1Q92598 858 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 EID2BQ96D98 161 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SNRNP40Q96DI7 357 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ZNF514Q96K75 400 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 C5orf34Q96MH7 638 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 TIMM29Q9BSF4 260 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 POLR1EQ9GZS1 481 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CLSTN2Q9H4D0 955 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 FAM83DQ9H4H8 585 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 PCDH9Q9HC56 1237 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC40A1Q9NP59 571 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 WASH6PQ9NQA3 447 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 FGF21Q9NSA1 209 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 DTLQ9NZJ0 730 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 PKD2L2Q9NZM6 624 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RARRES3Q9UL19 164 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 RPL26L1Q9UNX3 145 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 CHKBQ9Y259 395 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 FARSAQ9Y285 508 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SLC5A6Q9Y289 635 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 DNAJC16Q9Y2G8 782 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 SEC16AO15027 2179 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 PCSK5Q92824 1860 aa5.03□□□□□ -1.6
SNRNP40-204ENST00000474025 ANKUB1A6NFN9 424 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TLCD2A6NGC4 264 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 A6NL46 340 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 LGALS16A8MUM7 142 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TMCO5BA8MYB1 307 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 KMOO15229 486 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF185O15231 689 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 MATN3O15232 486 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 MFSD11O43934 449 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 MTX2O75431 263 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 SCRG1O75711 98 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM63AO94886 807 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC25A14O95258 325 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CAPN1P07384 714 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 MMP2P08253 660 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 RAB40ALP0C0E4 278 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 FERP16591 822 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF7P17097 686 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CA4P22748 312 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CES1P23141 567 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 IL4RP24394 825 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 VAV2P52735 878 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 DRG2P55039 364 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ITGA1P56199 1179 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 DCDC1P59894 354 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TUBB4BP68371 445 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 PDE1BQ01064 536 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ACY1Q03154 408 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ITKQ08881 620 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 NIPAL4Q0D2K0 466 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 GALNT2Q10471 571 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TUBB2AQ13885 445 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 QPCTQ16769 361 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 KHDC1Q4VXA5 237 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 BOLA3Q53S33 107 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ANKRD20A8PQ5CZ79 823 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CT47A1Q5JQC4 288 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 IZUMO3Q5VZ72 239 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ALS2CLQ60I27 953 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 PDPK2PQ6A1A2 396 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TXNRD3NBQ6F5E7 133 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 LCN10Q6JVE6 187 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 PPP1R2P3Q6NXS1 205 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 FAM198BQ6UWH4 519 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 IRF2BP2Q7Z5L9 587 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 C11orf96Q7Z7L8 435 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 LRRTM4Q86VH4 590 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 KMT5CQ86Y97 462 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 LRRC49Q8IUZ0 686 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 RHOT1Q8IXI2 618 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 IQCKQ8N0W5 287 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 D2HGDHQ8N465 521 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ENDOVQ8N8Q3 282 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC38A9Q8NBW4 561 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 GPR26Q8NDV2 337 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 NEK11Q8NG66 645 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 GPR150Q8NGU9 434 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ARRDC2Q8TBH0 407 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ENOX1Q8TC92 643 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CCHCR1Q8TD31 782 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 TEKT4Q8WW24 435 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 MR1Q95460 341 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 GLYATL1Q969I3 302 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CXorf40BQ96DE9 158 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 RANBP9Q96S59 729 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 CD180Q99467 661 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 SMAD5Q99717 465 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 BARD1Q99728 777 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 MAP3K3Q99759 626 aa5.02□□□□□ -1.61
SNRNP40-204ENST00000474025 ZSCAN5AQ9BUG6 496 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms