RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SGCZQ96LD1 299 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 RPP25Q9BUL9 199 aaKnown RBP1.65□□□□□ -2.15
CCDC39-203ENST00000473854 HERC2P3Q9BVR0 1158 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 CTDSP1Q9GZU7 261 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 ARFGAP3Q9NP61 516 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 PLCXD1Q9NUJ7 323 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 HDAC6Q9UBN7 1215 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 POLKQ9UBT6 870 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 MYH1P12882 1939 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 CENPFP49454 3210 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 COL24A1Q17RW2 1714 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 LRP6O75581 1613 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 KCPQ6ZWJ8 1503 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 CRB1P82279 1406 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 TNS3Q68CZ2 1445 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 UBR3Q6ZT12 1888 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 MAP3K19Q56UN5 1328 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 IGSF1Q8N6C5 1336 aa1.65□□□□□ -2.15
CCDC39-203ENST00000473854 LAMB1P07942 1786 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 NHSQ6T4R5 1651 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 THSD7AQ9UPZ6 1657 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 BAZ2AQ9UIF9 1905 aaKnown RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 PXDNLA1KZ92 1463 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TMEM94Q12767 1356 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 KIAA1551Q9HCM1 1747 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 ZCWPW2A0A1B0GU75 182 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 FAM90A20PA6NIJ5 464 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 HSPB2A8KAH6 182 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 SKAP2O75563 359 aaPredicted RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 KRT38O76015 456 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TSHBP01222 138 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 KRT18P05783 430 aaKnown RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 MYL1P05976 194 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TPOP07202 933 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 HMBSP08397 361 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 HMOX1P09601 288 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 CD72P21854 359 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 BDKRB2P30411 391 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 PRKAR2BP31323 418 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 RBM5P52756 815 aaKnown RBP eCLIP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 LIMK2P53671 638 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 PLIN5Q00G26 463 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 BTKQ06187 659 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 EIF4A2Q14240 407 aaKnown RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 HSPB2Q16082 182 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 SH2D4BQ5SQS7 431 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 SYCP2LQ5T4T6 812 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 PGBD2Q6P3X8 592 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TMEM64Q6YI46 380 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 MFSD6Q6ZSS7 791 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 NOL8Q76FK4 1167 aaKnown RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 LSM14AQ8ND56 463 aaKnown RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 SENP5Q96HI0 755 aaPredicted RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 CCDC136Q96JN2 1154 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 CMKLR1Q99788 373 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 THUMPD2Q9BTF0 503 aaKnown RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TAF1DQ9H5J8 278 aaPredicted RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TTC12Q9H892 705 aaPredicted RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 VEZTQ9HBM0 779 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TLR8Q9NR97 1041 aaKnown RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TERF2IPQ9NYB0 399 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 ZDHHC2Q9UIJ5 367 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 LRP5O75197 1615 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 CCDC88AQ3V6T2 1871 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 BRCA2P51587 3418 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 OVOS2A0A0G2JMS6 1433 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 KDM6AO15550 1401 aaPredicted RBP1.64□□□□□ -2.15
CCDC39-203ENST00000473854 COL4A1P02462 1669 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 ZNF831Q5JPB2 1677 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 PTPRCP08575 1304 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TTC21AQ8NDW8 1320 aa1.64□□□□□ -2.15
CCDC39-203ENST00000473854 TNS1Q9HBL0 1735 aaKnown RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 KIF24Q5T7B8 1368 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 ANKRD31Q8N7Z5 1873 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 MAST2Q6P0Q8 1798 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 DLEC1Q9Y238 1755 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 SLIT2O94813 1529 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 A0A087WW49 117 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 DUXAA6NLW8 204 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 KPNA7A9QM74 516 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 H0Y3Z8 333 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 MOCS3O95396 460 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 CSF1P09603 554 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 CEBPBP17676 345 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 UBA1P22314 1058 aaKnown RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 SERPINB3P29508 390 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 SERPINF1P36955 418 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 RARSP54136 660 aaKnown RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 HSPA2P54652 639 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 PICALMQ13492 652 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 HLTFQ14527 1009 aaKnown RBP eCLIP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 FASTKD1Q53R41 847 aaKnown RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 SULT6B1Q6IMI4 303 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 IGFL3Q6UXB1 125 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 MTSS1LQ765P7 747 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 TBC1D1Q86TI0 1168 aaPredicted RBP1.63□□□□□ -2.15
CCDC39-203ENST00000473854 ATG16L2Q8NAA4 619 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 BEST2Q8NFU1 509 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 LINS1Q8NG48 757 aa1.63□□□□□ -2.15
CCDC39-203ENST00000473854 GOLGA1Q92805 767 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms