RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ZNF574Q6ZN55 896 aaPredicted RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 SLC9B2Q86UD5 537 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 LILRA3Q8N6C8 439 aaPredicted RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 PPHLN1Q8NEY8 458 aaKnown RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 CPT1BQ92523 772 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 DCUN1D1Q96GG9 259 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 PRR11Q96HE9 360 aaPredicted RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 ZNF514Q96K75 400 aaPredicted RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 DDX47Q9H0S4 455 aaKnown RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 SEMA6CQ9H3T2 930 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 WASH6PQ9NQA3 447 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 CHRAC1Q9NRG0 131 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 SYBUQ9NX95 663 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 KCNK4Q9NYG8 393 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 FAM8A1Q9UBU6 413 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 RIMKLBQ9ULI2 386 aa18.59■□□□□ 0.57
PTCD3-210ENST00000473829 DNMT3AQ9Y6K1 912 aaPredicted RBP18.59■□□□□ 0.57
PTCD3-210ENST00000473829 ZFHX4Q86UP3 3567 aa18.58■□□□□ 0.57
PTCD3-210ENST00000473829 GOLGA6L10A0A0M3HER8 536 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 OR5K4A6NMS3 321 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 TLX3O43711 291 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-210ENST00000473829 CPNE6O95741 557 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 ATP1B2P14415 290 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-210ENST00000473829 HOXB3P14651 431 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-210ENST00000473829 XRCC1P18887 633 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-210ENST00000473829 MGAT1P26572 445 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 CCKBRP32239 447 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 CDK16Q00536 496 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 PCID2Q5JVF3 399 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 LRRC8BQ6P9F7 803 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 CREG2Q8IUH2 290 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 CLDN19Q8N6F1 224 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 GRAMD1AQ96CP6 724 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 LIN37Q96GY3 246 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-210ENST00000473829 LINC00615Q96LM1 132 aaPredicted RBP18.58■□□□□ 0.56
PTCD3-210ENST00000473829 SLC38A3Q99624 504 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 TBC1D10AQ9BXI6 508 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 POLR1BQ9H9Y6 1135 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 KCND1Q9NSA2 647 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 TMEM9Q9P0T7 183 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 PSMD13Q9UNM6 376 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 RAXQ9Y2V3 346 aa18.58■□□□□ 0.56
PTCD3-210ENST00000473829 ACACAQ13085 2346 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 CCDC187A0A096LP49 1063 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 MGAT4DA6NG13 374 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 SRRM3A6NNA2 597 aaPredicted RBP18.57■□□□□ 0.56
PTCD3-210ENST00000473829 CFAP99D6REC4 459 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 AGRPO00253 132 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 KCNJ13O60928 360 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 AVILO75366 819 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 RALBP11234 206 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 LSSP48449 732 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 LAMB3Q13751 1172 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 SEMA3AQ14563 771 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 ZNF658BQ4V348 819 aaPredicted RBP18.57■□□□□ 0.56
PTCD3-210ENST00000473829 AFTPHQ6ULP2 937 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 PIM3Q86V86 326 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 CAND1Q86VP6 1230 aaKnown RBP18.57■□□□□ 0.56
PTCD3-210ENST00000473829 GPR150Q8NGU9 434 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 OR2L2Q8NH16 312 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 HEXDCQ8WVB3 486 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 TMEM74Q96NL1 305 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 IL22Q9GZX6 179 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 STN1Q9H668 368 aaKnown RBP18.57■□□□□ 0.56
PTCD3-210ENST00000473829 ASCL3Q9NQ33 180 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 TREX1Q9NSU2 369 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 PRSS21Q9Y6M0 314 aa18.57■□□□□ 0.56
PTCD3-210ENST00000473829 ANKRD11Q6UB99 2663 aaPredicted RBP18.56■□□□□ 0.56
PTCD3-210ENST00000473829 IGHV5-10-1A0A0J9YXX1 117 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 CTAGE9A4FU28 777 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 HGFP14210 728 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 NMBRP28336 390 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 NPY2RP49146 381 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 SQSTM1Q13501 440 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 PHF19Q5T6S3 580 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 METRNLQ641Q3 311 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 NLRP9Q7RTR0 991 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 MPP5Q8N3R9 675 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 GRK7Q8WTQ7 553 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 PEX13Q92968 403 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 BFARQ9NZS9 450 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 MARCH4Q9P2E8 410 aaPredicted RBP18.56■□□□□ 0.56
PTCD3-210ENST00000473829 SAR1BQ9Y6B6 198 aa18.56■□□□□ 0.56
PTCD3-210ENST00000473829 LILRA5A6NI73 299 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 DXOO77932 396 aaKnown RBP18.55■□□□□ 0.56
PTCD3-210ENST00000473829 VIPP01282 170 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 MPSTP25325 297 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 PTGIRP43119 386 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 MAPK9P45984 424 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 PRAMEP78395 509 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 GPLD1P80108 840 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 ITIH4Q14624 930 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 C16orf72Q14CZ0 275 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 RPE65Q16518 533 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 CLPPQ16740 277 aaPredicted RBP18.55■□□□□ 0.56
PTCD3-210ENST00000473829 DUS1LQ6P1R4 473 aaKnown RBP18.55■□□□□ 0.56
PTCD3-210ENST00000473829 FOXR1Q6PIV2 292 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 CES3Q6UWW8 571 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 PACS1Q6VY07 963 aa18.55■□□□□ 0.56
PTCD3-210ENST00000473829 TMEM26Q6ZUK4 368 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms