RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 MCUQ8NE86 351 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 RAB40AQ8WXH6 277 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 MRPS27Q92552 414 aaKnown RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 GTF3C6Q969F1 213 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 FAM149B1Q96BN6 582 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 MOAP1Q96BY2 351 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 ZNF653Q96CK0 615 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 DAZAP1Q96EP5 407 aaKnown RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 MYEOVQ96EZ4 313 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 SNX18Q96RF0 628 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 SERINC2Q96SA4 455 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 H2AFJQ9BTM1 129 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 C1QTNF7Q9BXJ2 289 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 HEMGNQ9BXL5 484 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 TEX12Q9BXU0 123 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 RNF26Q9BY78 433 aaPredicted RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 TXLNGYQ9BZA5 131 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 NUF2Q9BZD4 464 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 WDR11Q9BZH6 1224 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 NUAK2Q9H093 628 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 MUC13Q9H3R2 512 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 ZWILCHQ9H900 591 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 LMAN1LQ9HAT1 526 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 WDR6Q9NNW5 1121 aaKnown RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 SEMA4BQ9NPR2 832 aaPredicted RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 CCDC177Q9NQR7 707 aaPredicted RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 DUSP22Q9NRW4 184 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 CTNNAL1Q9UBT7 734 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 HAO1Q9UJM8 370 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 MKLN1Q9UL63 735 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 PCDHGB5Q9Y5G0 923 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 SESN1Q9Y6P5 492 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 MYH8P13535 1937 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 HELZP42694 1942 aaKnown RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 MTCL1Q9Y4B5 1905 aaKnown RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 NOTCH1P46531 2555 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 CSPG4Q6UVK1 2322 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 TNRC6BQ9UPQ9 1833 aaKnown RBP2.4□□□□□ -2.03
CALD1-216ENST00000473714 CENPEQ02224 2701 aa2.4□□□□□ -2.03
CALD1-216ENST00000473714 GPR75-ASB3A0A0A6YYF3 556 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CENPVL1A0A0U1RR11 272 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 C17orf113A0A1B0GUU1 675 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 TCRBV7S3A2A0A539 114 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 OR6C68A6NDL8 312 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ASB14A6NK59 587 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 TMEM200CA6NKL6 621 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 VWC2LB2RUY7 222 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 MCIDASD6RGH6 385 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CTDSP2O14595 271 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 BCAT2O15382 392 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 KCNAB3O43448 404 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 TNFSF14O43557 240 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 GPC4O75487 556 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 MTA2O94776 668 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CNTN5O94779 1100 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 KAT7O95251 611 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 MT-CO3P00414 261 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CCDC192P0DO97 292 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CHRNB1P11230 501 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 FCGR2AP12318 317 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CD59P13987 128 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ARSAP15289 507 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 EPCAMP16422 314 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 TGM2P21980 687 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 KLRC2P26717 231 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 NDUFS1P28331 727 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 EEF1DP29692 281 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 CTNNA1P35221 906 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 THPOP40225 353 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 PSMB10P40306 273 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CAPZA2P47755 286 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 BLOC1S1P78537 153 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ITGADQ13349 1161 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 BECN1Q14457 450 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SMC1AQ14683 1233 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 KPNB1Q14974 876 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 NAB2Q15742 525 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 NTRK2Q16620 822 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 HIST2H2ACQ16777 129 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 PLEKHS1Q5SXH7 462 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 GKAP1Q5VSY0 366 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 FAM171A1Q5VUB5 890 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ANKRD16Q6P6B7 361 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SHQ1Q6PI26 577 aaKnown RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 NCEH1Q6PIU2 408 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 RANBP10Q6VN20 620 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 Q6ZNX1 250 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 FAM83HQ6ZRV2 1179 aaPredicted RBP2.39□□□□□ -2.03
CALD1-216ENST00000473714 FAM47EQ6ZV65 393 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 MOB3CQ70IA8 216 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 CHST9Q7L1S5 443 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 KRT74Q7RTS7 529 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 PRSS45Q7RTY3 260 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 FAM160B2Q86V87 743 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 IGFN1Q86VF2 1251 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 LAS2Q8IYD9 372 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 ADGRF2Q8IZF7 708 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 PLD5Q8N7P1 536 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 EXD3Q8N9H8 876 aa2.39□□□□□ -2.03
CALD1-216ENST00000473714 SCAIQ8N9R8 606 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms