RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 NR1D2Q14995 579 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 SNX20Q7Z614 316 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 PLXDC1Q8IUK5 500 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 SLITRK4Q8IW52 837 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 BEND7Q8N7W2 519 aaPredicted RBP11.33□□□□□ -0.6
CPNE1-222ENST00000473373 RASGEF1AQ8N9B8 481 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 OR52K1Q8NGK4 314 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 HEXDCQ8WVB3 486 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 USP7Q93009 1102 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 SGF29Q96ES7 293 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 DNAJC1Q96KC8 554 aaKnown RBP11.33□□□□□ -0.6
CPNE1-222ENST00000473373 TTC1Q99614 292 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 COPS8Q99627 209 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 TBC1D10AQ9BXI6 508 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 DPH1Q9BZG8 443 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 EPB41L1Q9H4G0 881 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 PRORYQ9H606 182 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 VPS37BQ9H9H4 285 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 RAB6BQ9NRW1 208 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 POT1Q9NUX5 634 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 IMP3Q9NV31 184 aaKnown RBP11.33□□□□□ -0.6
CPNE1-222ENST00000473373 PAK5Q9P286 719 aa11.33□□□□□ -0.6
CPNE1-222ENST00000473373 HELZ2Q9BYK8 2649 aaKnown RBP11.32□□□□□ -0.6
CPNE1-222ENST00000473373 PRAMEF33A0A0G2JMD5 474 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 OR52A4PA6NMU1 304 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 EFCAB7A8K855 629 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ERI2A8K979 691 aaKnown RBP11.32□□□□□ -0.6
CPNE1-222ENST00000473373 CDRT15L2A8MXV6 281 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 TK2O00142 265 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 PRAMEF10O60809 474 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 UBXN7O94888 489 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 POLBP06746 335 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 APRTP07741 180 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 CSF2RBP32927 897 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 CTSCP53634 463 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 PRAMEP78395 509 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ZFP36L1Q07352 338 aaKnown RBP11.32□□□□□ -0.6
CPNE1-222ENST00000473373 LAMB3Q13751 1172 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 NFE2L1Q14494 772 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 C16orf72Q14CZ0 275 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 SKIDA1Q1XH10 827 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 CCDC38Q502W7 563 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ARHGAP40Q5TG30 622 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ARMC6Q6NXE6 501 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 IRGCQ6NXR0 463 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 IGF2-ASQ6U949 168 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 CCDC81Q6ZN84 652 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 TMEM26Q6ZUK4 368 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 GPR155Q7Z3F1 870 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 TMPRSS9Q7Z410 1059 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ZNF605Q86T29 641 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 OTUD6BQ8N6M0 293 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 DTX3LQ8TDB6 740 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 STYXQ8WUJ0 223 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ART4Q93070 314 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 C12orf66Q96MD2 445 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ETNK1Q9HBU6 452 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 SMOXQ9NWM0 555 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 SLC39A1Q9NY26 324 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 TMEM9Q9P0T7 183 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 ANAPC5Q9UJX4 755 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 TMPRSS11EQ9UL52 423 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 DNMT3AQ9Y6K1 912 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-222ENST00000473373 SDK2Q58EX2 2172 aa11.32□□□□□ -0.6
CPNE1-222ENST00000473373 FLNBO75369 2602 aaKnown RBP11.31□□□□□ -0.6
CPNE1-222ENST00000473373 A0A1W2PNU3 283 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-222ENST00000473373 HEATR9A2RTY3 570 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 F8W8V4 182 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 THRAP10827 490 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 PLA2G2AP14555 144 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ETS1P14921 441 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 XRCC1P18887 633 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ETV5P41161 510 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 SLC19A1P41440 591 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ARL4DP49703 201 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ATP1A2P50993 1020 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ZNF140P52738 457 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-222ENST00000473373 TLE3Q04726 772 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 CACNG1Q06432 222 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 FOXM1Q08050 763 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 GPR33Q49SQ1 333 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 TAF1BQ53T94 588 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-222ENST00000473373 MANEAQ5SRI9 462 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 KLHL35Q6PF15 583 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 CLEC14AQ86T13 490 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ZNF547Q8IVP9 402 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 RBM12BQ8IXT5 1001 aaKnown RBP11.31□□□□□ -0.6
CPNE1-222ENST00000473373 CFAP206Q8IYR0 622 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 NXPE1Q8N323 547 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ZNF843Q8N446 348 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ZSCAN1Q8NBB4 408 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 PPHLN1Q8NEY8 458 aaKnown RBP11.31□□□□□ -0.6
CPNE1-222ENST00000473373 NAT14Q8WUY8 206 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 TGM7Q96PF1 710 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 TAAR9Q96RI9 348 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 WWP1Q9H0M0 922 aa11.31□□□□□ -0.6
CPNE1-222ENST00000473373 ARNT2Q9HBZ2 717 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms