RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TYK2P29597 1187 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 SERPINB8P50452 374 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 CSRP3P50461 194 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 SLC12A2P55011 1212 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 RAB10P61026 200 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 EIF2B5Q13144 721 aaKnown RBP18.89■□□□□ 0.62
PSPC1-203ENST00000471658 FZD2Q14332 565 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 ZKSCAN8Q15776 578 aaPredicted RBP18.89■□□□□ 0.62
PSPC1-203ENST00000471658 ALG11Q2TAA5 492 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 PAQR3Q6TCH7 311 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 C4orf33Q8N1A6 199 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 CD200R1Q8TD46 325 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 PIGKQ92643 395 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 KCNJ9Q92806 393 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 TAS2R13Q9NYV9 303 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 GULP1Q9UBP9 304 aa18.89■□□□□ 0.62
PSPC1-203ENST00000471658 ZNF318Q5VUA4 2279 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 H3BMM5 538 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 OPA1O60313 960 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 VPS26AO75436 327 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 TOP3BO95985 862 aaKnown RBP18.89■□□□□ 0.61
PSPC1-203ENST00000471658 C2P06681 752 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 KELP23276 732 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 MAGEA12P43365 314 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 GNPDA1P46926 289 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 NUBP1P53384 320 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 SRP54P61011 504 aaKnown RBP18.89■□□□□ 0.61
PSPC1-203ENST00000471658 IRF9Q00978 393 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 TCEA2Q15560 299 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 PYCR3Q53H96 274 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 XKR5Q6UX68 686 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 SH2D5Q6ZV89 423 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 RAPH1Q70E73 1250 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 LRRTM4Q86VH4 590 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 EXOC3L1Q86VI1 746 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 SRRM1Q8IYB3 904 aaKnown RBP18.89■□□□□ 0.61
PSPC1-203ENST00000471658 SPATA6LQ8N4H0 392 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 ISL2Q96A47 359 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 SCARF2Q96GP6 870 aaPredicted RBP18.89■□□□□ 0.61
PSPC1-203ENST00000471658 CCM2Q9BSQ5 444 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 VPS11Q9H270 941 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 TCEAL2Q9H3H9 227 aaPredicted RBP18.89■□□□□ 0.61
PSPC1-203ENST00000471658 ACBD3Q9H3P7 528 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 CARS2Q9HA77 564 aaKnown RBP18.89■□□□□ 0.61
PSPC1-203ENST00000471658 KLQ9UEF7 1012 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 KLF15Q9UIH9 416 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 PILRBQ9UKJ0 227 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 GPR34Q9UPC5 381 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 DHRS7Q9Y394 339 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 GPSM3Q9Y4H4 160 aa18.89■□□□□ 0.61
PSPC1-203ENST00000471658 SLC35E2BP0CK96 405 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 DNAJC3Q13217 504 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 PRAMEF14Q5SWL7 426 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 CHST15Q7LFX5 561 aaPredicted RBP18.88■□□□□ 0.61
PSPC1-203ENST00000471658 IQCHQ86VS3 1027 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 HID1Q8IV36 788 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 FAM174AQ8TBP5 190 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 ANKRD49Q8WVL7 239 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 ELMO1Q92556 727 aa18.88■□□□□ 0.61
PSPC1-203ENST00000471658 ZNF514Q96K75 400 aaPredicted RBP18.88■□□□□ 0.61
PSPC1-203ENST00000471658 UNKQ9C0B0 810 aaKnown RBP18.88■□□□□ 0.61
PSPC1-203ENST00000471658 SPATS2LQ9NUQ6 558 aaKnown RBP18.88■□□□□ 0.61
PSPC1-203ENST00000471658 TRMT6Q9UJA5 497 aaKnown RBP18.88■□□□□ 0.61
PSPC1-203ENST00000471658 TSR3Q9UJK0 312 aaKnown RBP18.88■□□□□ 0.61
PSPC1-203ENST00000471658 A0A096LPK6 155 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 A0A1B0GVT2 93 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 TNFRSF10CO14798 259 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 WISP3O95389 354 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-203ENST00000471658 FTH1P02794 183 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 AOAHP28039 575 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 ILF2Q12905 390 aaKnown RBP18.87■□□□□ 0.61
PSPC1-203ENST00000471658 DLG1Q12959 904 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 PDAP1Q13442 181 aaKnown RBP18.87■□□□□ 0.61
PSPC1-203ENST00000471658 PTK2BQ14289 1009 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 ZNF658BQ4V348 819 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-203ENST00000471658 ACSBG2Q5FVE4 666 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 FAM83HQ6ZRV2 1179 aaPredicted RBP18.87■□□□□ 0.61
PSPC1-203ENST00000471658 GALNT13Q8IUC8 556 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 CPNE9Q8IYJ1 553 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 TLCD1Q96CP7 247 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 TSPAN17Q96FV3 270 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 PANX3Q96QZ0 392 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 GPAMQ9HCL2 828 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 LATS2Q9NRM7 1088 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 PCMTD2Q9NV79 361 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 DNAJC16Q9Y2G8 782 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 ST14Q9Y5Y6 855 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 PIKFYVEQ9Y2I7 2098 aa18.87■□□□□ 0.61
PSPC1-203ENST00000471658 QSOX1O00391 747 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 VILLO15195 856 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 KMOO15229 486 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 ACP5P13686 325 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 KRT4P19013 534 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 CD9P21926 228 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 CRABP2P29373 138 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 AFF3P51826 1226 aaKnown RBP18.86■□□□□ 0.61
PSPC1-203ENST00000471658 NXPH1P58417 271 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 ARHGAP8P85298 464 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 PPARDQ03181 441 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 BOP1Q14137 746 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms