RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MSH2P43246 934 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 RABIFP47224 123 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 CLCNKAP51800 687 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 HK3P52790 923 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 EIF3BP55884 814 aaKnown RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 KIF19Q2TAC6 998 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 ZNF542PQ5EBM4 170 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 ACSBG2Q5FVE4 666 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PRAMEF14Q5SWL7 426 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 CEP85LQ5SZL2 805 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 LYPLAL1Q5VWZ2 237 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 CAPRIN2Q6IMN6 1127 aaKnown RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 LPCAT2Q7L5N7 544 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 ISCA2Q86U28 154 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 C17orf82Q86X59 251 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PHYKPLQ8IUZ5 450 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 SPATA6LQ8N4H0 392 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 BANPQ8N9N5 519 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 OR56A4Q8NGH8 313 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 OR6Y1Q8NGX8 325 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 GPBAR1Q8TDU6 330 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PTERQ96BW5 349 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 FAM136AQ96C01 138 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PDLIM5Q96HC4 596 aaKnown RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 GPR21Q99679 349 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 TMEM168Q9H0V1 697 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 OR52A5Q9H2C5 316 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PPANQ9NQ55 473 aaKnown RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 MKS1Q9NXB0 559 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PSMC3IPQ9P2W1 217 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 TBK1Q9UHD2 729 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 SNX11Q9Y5W9 270 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 DNMT3AQ9Y6K1 912 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 ATXN2Q99700 1313 aaKnown RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 KNL1Q8NG31 2342 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 SDK1Q7Z5N4 2213 aa9.71□□□□□ -0.85
SF3A1-207ENST00000471342 A0A1B0GVT2 93 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SMIM23A6NLE4 172 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 A6NNZ2 444 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SCAMP1O15126 338 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 BCAT2O15382 392 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 NDUFS3O75489 264 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 EPN2O95208 641 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 MATN4O95460 622 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 CSF2P04141 144 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 PYGLP06737 847 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SNRPAP09012 282 aaKnown RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 ZNF37AP17032 561 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 ITGB6P18564 788 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SPRP35270 261 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 RXRGP48443 463 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SERPINB9P50453 376 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SRP54P61011 504 aaKnown RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 ARHGAP8P85298 464 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 POU4F1Q01851 419 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 DNAJC3Q13217 504 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 NFE2L1Q14494 772 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 PPP1R3AQ16821 1122 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 ZNF423Q2M1K9 1284 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 RNF187Q5TA31 235 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 LYSMD4Q5XG99 296 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 METRNLQ641Q3 311 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 FAM45BPQ6NSW5 357 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 ENPP7Q6UWV6 458 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 DBX2Q6ZNG2 339 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SDCCAG8Q86SQ7 713 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SLC25A45Q8N413 288 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 RIBC1Q8N443 379 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 PAF1Q8N7H5 531 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 OR2L2Q8NH16 312 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 FAM45AQ8TCE6 357 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SPACA7Q96KW9 195 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 INSM2Q96T92 566 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 ZDHHC5Q9C0B5 715 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 SMOC1Q9H4F8 434 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 PPCSQ9HAB8 311 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 IL21RQ9HBE5 538 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 POPDC3Q9HBV1 291 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 PHPT1Q9NRX4 125 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 UCKL1Q9NWZ5 548 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 NSMCE4AQ9NXX6 385 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 TMEM216Q9P0N5 145 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 ADAMTS6Q9UKP5 1117 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 PCOLCE2Q9UKZ9 415 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 GRID1Q9ULK0 1009 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 CORO1CQ9ULV4 474 aaPredicted RBP9.71□□□□□ -0.86
SF3A1-207ENST00000471342 PCDHB1Q9Y5F3 818 aa9.71□□□□□ -0.86
SF3A1-207ENST00000471342 LY6G6EA0A0G2JKS1 128 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 TLDC2A0PJX2 215 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 KRT87PA6NCN2 255 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 MGAT4DA6NG13 374 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 GPR89AB7ZAQ6 455 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 GFYI3L273 518 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 GOLGA8RI6L899 631 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 GRID2O43424 1007 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 NDUFS2O75306 463 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 INHBAP08476 426 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 GPR89BP0CG08 455 aa9.7□□□□□ -0.86
SF3A1-207ENST00000471342 DHRS4L1P0CG22 281 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms