RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NDUFS3O75489 264 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SRP72O76094 671 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 KLF8O95600 359 aaPredicted RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 GOT2P00505 430 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 EGFP01133 1207 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SLC4A1P02730 911 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 DNTTP04053 509 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 MPOP05164 745 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 CTSLP07711 333 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ITGA2BP08514 1039 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ALPIP09923 528 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ELFN1P0C7U0 828 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ADRB3P13945 408 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 HOXB2P14652 356 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NR1D1P20393 614 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NME2P22392 152 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 GCAP28676 217 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 MC4RP32245 332 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 MMP12P39900 470 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SLC1A2P43004 574 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 LEPRP48357 1165 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 PSMD8P48556 350 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 CCT5P48643 541 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SPINT3P49223 89 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SERPINB8P50452 374 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 STC1P52823 247 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SLC12A2P55011 1212 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ADARP55265 1226 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 MAGOHP61326 146 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 PPP2R2AP63151 447 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SATB1Q01826 763 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 POU4F1Q01851 419 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TAGLNQ01995 201 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 EFTUD2Q15029 972 aaKnown RBP eCLIP6.58□□□□□ -1.363e-6■■■■■ 41.9
VAMP3-202ENST00000470357 CST6Q15828 149 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 CDKN3Q16667 212 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TYSND1Q2T9J0 566 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ZNF284Q2VY69 593 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TMEM52BQ4KMG9 183 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TAF1BQ53T94 588 aaPredicted RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 C2orf27AQ580R0 203 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TTMPQ5BVD1 217 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 UBAP2Q5T6F2 1119 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 EMC10Q5UCC4 262 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 LRRC66Q68CR7 880 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NAIF1Q69YI7 327 aaPredicted RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 CRTC1Q6UUV9 634 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 USP30Q70CQ3 517 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ZNF765Q7L2R6 523 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 PARS2Q7L3T8 475 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SNX20Q7Z614 316 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 PTAR1Q7Z6K3 402 aaPredicted RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ZC3HC1Q86WB0 502 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 MMAAQ8IVH4 418 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SRRM1Q8IYB3 904 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ZNF366Q8N895 744 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 IL17RCQ8NAC3 791 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 OR13C4Q8NGS5 318 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NETO1Q8TDF5 533 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 HEXDCQ8WVB3 486 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ARL8AQ96BM9 186 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 TSNARE1Q96NA8 513 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ACOX2Q99424 681 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 IER2Q9BTL4 223 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 ZSCAN5AQ9BUG6 496 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 C1QTNF7Q9BXJ2 289 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 IQCGQ9H095 443 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 FBRSL1Q9HCM7 1045 aaKnown RBP6.58□□□□□ -1.36
VAMP3-202ENST00000470357 PCDH12Q9NPG4 1184 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SMYD2Q9NRG4 433 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NKIRAS1Q9NYS0 192 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 B4GALT6Q9UBX8 382 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 SLC2A6Q9UGQ3 507 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 FZD4Q9ULV1 537 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 MMP17Q9ULZ9 603 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NCKAP1Q9Y2A7 1128 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 PCDHB1Q9Y5F3 818 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 AK5Q9Y6K8 562 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 PLXNB3Q9ULL4 1909 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
VAMP3-202ENST00000470357 FAM95CA0A1B0GW59 222 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 CHURC1-FNTBB4DL54 471 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 H3BMM5 538 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 QSOX1O00391 747 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 AURKAO14965 403 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 AREL1O15033 823 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 TM9SF1O15321 606 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 PRPF4O43172 522 aaKnown RBP eCLIP6.57□□□□□ -1.36
VAMP3-202ENST00000470357 ZWINTO95229 277 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 CLDN7O95471 211 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 PRAMEF1O95521 474 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 ESR1P03372 595 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 PRKCGP05129 697 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 GSTA1P08263 222 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 RALBP11234 206 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 ACADMP11310 421 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 COL6A2P12110 1019 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 BRAFP15056 766 aa6.57□□□□□ -1.36
VAMP3-202ENST00000470357 ZNF7P17097 686 aaPredicted RBP6.57□□□□□ -1.36
VAMP3-202ENST00000470357 BPIP17213 487 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms