RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 IL22RA1Q8N6P7 574 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 ACRBPQ8NEB7 543 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 SPATA13Q96N96 652 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 ZNF768Q9H5H4 540 aaKnown RBP16■□□□□ 0.15
COL9A3-208ENST00000469802 UGT1A7Q9HAW7 530 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 UGT1A10Q9HAW8 530 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 UGT1A8Q9HAW9 530 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 ARL5AQ9Y689 179 aa16■□□□□ 0.15
COL9A3-208ENST00000469802 MACROD2A1Z1Q3 448 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 STX7O15400 261 aaKnown RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 CAPN5O15484 640 aaPredicted RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 IPO7O95373 1038 aaKnown RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 TYRP1P17643 537 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 ITGB6P18564 788 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 LEPRP48357 1165 aaKnown RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 RWDD2BP57060 319 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 EIF3EP60228 445 aaKnown RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 OLIG2Q13516 323 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 TBR1Q16650 682 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 AADACL2Q6P093 401 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 AMZ2Q86W34 360 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 TMEM139Q8IV31 216 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 NLGN4XQ8N0W4 816 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 NLGN4YQ8NFZ3 816 aaPredicted RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 GPR150Q8NGU9 434 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 CXorf40BQ96DE9 158 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 TTC25Q96NG3 672 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 FAM118BQ9BPY3 351 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 C19orf43Q9BQ61 176 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 RAB33BQ9H082 229 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 EPHA6Q9UF33 1036 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 AAR2Q9Y312 384 aaKnown RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 DNMT3AQ9Y6K1 912 aaPredicted RBP15.99■□□□□ 0.15
COL9A3-208ENST00000469802 SPTA1P02549 2419 aa15.99■□□□□ 0.15
COL9A3-208ENST00000469802 C5orf60A6NFR6 353 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 OR2AG2A6NM03 316 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 AGAP14A8MT82 685 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 KCNN4O15554 427 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 POP7O75817 140 aaKnown RBP15.98■□□□□ 0.15
COL9A3-208ENST00000469802 STK17BO94768 372 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 FAM87AP0C7U9 286 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 PYGMP11217 842 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 LPOP22079 712 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-208ENST00000469802 MAP4P27816 1152 aaKnown RBP15.98■□□□□ 0.15
COL9A3-208ENST00000469802 HALP42357 657 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 XIAPP98170 497 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 MAP7Q14244 749 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 NFE2L1Q14494 772 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 DENND5AQ6IQ26 1287 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 TMEM220Q6QAJ8 160 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 OR4K2Q8NGD2 314 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 CCDC110Q8TBZ0 833 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 ZNF398Q8TD17 642 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 SLC45A3Q96JT2 553 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 ZNF514Q96K75 400 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-208ENST00000469802 TGM7Q96PF1 710 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 FERMT1Q9BQL6 677 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 ARNT2Q9HBZ2 717 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 STARD5Q9NSY2 213 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 SEMA5BQ9P283 1151 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 TRIM10Q9UDY6 481 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 FKBPLQ9UIM3 349 aa15.98■□□□□ 0.15
COL9A3-208ENST00000469802 C2orf81A6NN90 581 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 POLR1CO15160 346 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-208ENST00000469802 SGTAO43765 313 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 ZNF189O75820 626 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-208ENST00000469802 SRP72O76094 671 aaKnown RBP15.97■□□□□ 0.15
COL9A3-208ENST00000469802 STK10O94804 968 aaKnown RBP15.97■□□□□ 0.15
COL9A3-208ENST00000469802 TJP3O95049 919 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 AMD1P17707 334 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 ZNF140P52738 457 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-208ENST00000469802 ABHD18Q0P651 414 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 RPE65Q16518 533 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 LONRF2Q1L5Z9 754 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 BCL7AQ4VC05 210 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 METRNLQ641Q3 311 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 DARS2Q6PI48 645 aaKnown RBP15.97■□□□□ 0.15
COL9A3-208ENST00000469802 KLHL6Q8WZ60 621 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 PPP1R2P1Q96PQ5 205 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 KCTD3Q9Y597 815 aa15.97■□□□□ 0.15
COL9A3-208ENST00000469802 ASH1LQ9NR48 2969 aaKnown RBP15.97■□□□□ 0.15
COL9A3-208ENST00000469802 MYO18BQ8IUG5 2567 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 LOC101059948A0A1B0GTJ6 334 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 GOLGA6L3A6NEY3 463 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 MGAT4DA6NG13 374 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 ZNF891A8MT65 544 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 J3QKU1 62 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 KIF1CO43896 1103 aaKnown RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 MSH3P20585 1137 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 AKT1P31749 480 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 STAT5AP42229 794 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 NAP1L1P55209 391 aaKnown RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 PPP1CAP62136 330 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 SH3BP2P78314 561 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 KLF1Q13351 362 aaPredicted RBP15.96■□□□□ 0.15
COL9A3-208ENST00000469802 PRPSAP1Q14558 356 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 FNBP1LQ5T0N5 605 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 KCTD11Q693B1 232 aa15.96■□□□□ 0.15
COL9A3-208ENST00000469802 BEND7Q8N7W2 519 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms