RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 KLHL8Q9P2G9 620 aaPredicted RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 CNOT11Q9UKZ1 510 aaKnown RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 AP4E1Q9UPM8 1137 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 CCDC195A0A1B0GUA6 201 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 F8W036 122 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 AXIN1O15169 862 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 PHGDHO43175 533 aaKnown RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 LRCH4O75427 683 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 TNFRSF21O75509 655 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 URODP06132 367 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 UNGP13051 313 aaPredicted RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 MATN1P21941 496 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 TPI1P60174 286 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 SEMG2Q02383 582 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 MLLT1Q03111 559 aaPredicted RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 GALNT2Q10471 571 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 TAF10Q12962 218 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 OLIG2Q13516 323 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 KIAA0319Q5VV43 1072 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 TSPYL5Q86VY4 417 aaPredicted RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 XYLT1Q86Y38 959 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 TRIM43Q96BQ3 446 aaPredicted RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 RPRD1AQ96P16 312 aaPredicted RBP9.85□□□□□ -0.83
NUP50-214ENST00000469163 MNTQ99583 582 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 HERPUD2Q9BSE4 406 aa9.85□□□□□ -0.83
NUP50-214ENST00000469163 CFLARO15519 480 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 TPH1P17752 444 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 HLA-FP30511 346 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 CPOXP36551 454 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 IL12RB1P42701 662 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 GPX6P59796 221 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 PSMD5Q16401 504 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 ZNF544Q6NX49 715 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 BEND4Q6ZU67 534 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 MON1BQ7L1V2 547 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 STRA8Q7Z7C7 330 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 ADCK1Q86TW2 530 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 P3H2Q8IVL5 708 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 GLIS1Q8NBF1 620 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 KLHDC9Q8NEP7 349 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 OR6F1Q8NGZ6 308 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 FAF2Q96CS3 445 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 GAL3ST1Q99999 423 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 MCOLN1Q9GZU1 580 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 C1orf21Q9H246 121 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 SAYSD1Q9NPB0 183 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 STAP1Q9ULZ2 295 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 NME7Q9Y5B8 376 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 ZSWIM8A7E2V4 1837 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 A0A1W2PQH9 124 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 CCL16O15467 120 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 AVILO75366 819 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 KRT37O76014 449 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 APOA4P06727 396 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 YES1P07947 543 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 GPC1P35052 558 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 SCN1AP35498 2009 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 COILP38432 576 aaPredicted RBP9.84□□□□□ -0.83
NUP50-214ENST00000469163 GALNT3Q14435 633 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 KYAT1Q16773 422 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 TYSND1Q2T9J0 566 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 EFHC2Q5JST6 749 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 C15orf39Q6ZRI6 1047 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 MAMDC2Q7Z304 686 aaPredicted RBP9.84□□□□□ -0.83
NUP50-214ENST00000469163 FAM124AQ86V42 546 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 LILRA2Q8N149 483 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 OR6K2Q8NGY2 324 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 ENKURQ8TC29 256 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 PPWD1Q96BP3 646 aaKnown RBP9.84□□□□□ -0.83
NUP50-214ENST00000469163 BEX2Q9BXY8 128 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 RANBP3Q9H6Z4 567 aaPredicted RBP9.84□□□□□ -0.83
NUP50-214ENST00000469163 AFF4Q9UHB7 1163 aaKnown RBP9.84□□□□□ -0.83
NUP50-214ENST00000469163 OTOFQ9HC10 1997 aa9.84□□□□□ -0.83
NUP50-214ENST00000469163 CTDSP2O14595 271 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 GMDSO60547 372 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 NDST3O95803 873 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 TCN1P20061 433 aaPredicted RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 GP5P40197 560 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 YAP1P46937 504 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 LHX1P48742 406 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CXCR3P49682 368 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 OR2B6P58173 313 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CYP4F2P78329 520 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 TXNL4AP83876 142 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 SLC6A3Q01959 620 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CYP4F3Q08477 520 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CCDC85BQ15834 202 aaPredicted RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 Q5BKY6 102 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 GRTP1Q5TC63 336 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 KIAA1324Q6UXG2 1013 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 SPOCD1Q6ZMY3 1216 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CLEC20AQ6ZU45 233 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CEP68Q76N32 757 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CHSY1Q86X52 802 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 FAM126BQ8IXS8 530 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 ZC3H3Q8IXZ2 948 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 CELF2-AS1Q8N7Q2 184 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SLC5A11Q8WWX8 675 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SNRNP25Q9BV90 132 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 KIFC1Q9BW19 673 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms